| Id Trinity | FTRINITY_DN55851_c2_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_268992 |
| Sequence | AATTAAGCCAAGGTGGTATCTTTTTTCCCTTGTTTCCAGTCCCACTCTCATAATGCTGATTGTAGTTGGAGAATGATTGACATTGCAAATTAGTGACCAC AAATAAGTCAAGGCTTGTGCATTGATTAAACTTGGAATTGGATCAAATATTATCCGAAACTACTATATTACTAATTCAAGGAGAGAATTGCAGTCGGCTA GTCAAAAGAAACTAACTTGGTGGCCCTGGTGTTTTGATTATGGCTGATACTACAGTTACATCAGACCAATCTTCTACTTCCTCGCTGAACGCTGCTCGAA TAATCTGTCACGTATGTCACACACAGTTTTCCCAGTACACATGTCCTCGATGCAATTCAAGATACTGTTCCCTCCAATGTTACAAAGTAAGTAAAGTTTA CCTATATGCTGACTTGAGCTAGTTATAAGCTTATGATAAATTATGTGTTGCAAGGCTCTGTGTCTGGCCAGACAACATTTACTAAAATTTGGATTTCCTA TCATGTTATGTGACATTGGCATGTCAAGACTTGATATTTATATGCTACAAATATTTTTGAATGGAGCAAAATGATTCACTGGATGAGGAAGTGTGCTTAA ATTGTTTAAGTATTTTGGAAATTCACTTAATATTTTCGATGCTTAGCATCATGAGGACATTTTACAGGATAAATTATATTTGGGTTTATCAATGCATTTC CCCCTCTTCTCTTTCCATCTGAATTATTCCAAATTTGGCATTGTATGTACTTTCGACATGCTATCAAGCTAGGATACTGTTCTAGTAGTGTGCCTTGTTT TGCATGTACTATGTATATTACTGTGCTTTTATTTTTTCTACTTCGGCGAGCAGTCCAAATATTCTAACGAGCCTTTTATTTTGGCAATTGGTTAAATTTT TGTTGGATGTTTATGATTTTGAAAAATGGTTTTTACTTGCATGCTATTTCTATAGATAACTCTGATCTTGACCCTTATTTTCTTATAAACCGCTATGAAC ATTATCCTTTATGTTGTAATTTTGACAGTCTCATAGTCTTCGTTGTACTGAGTCCTTCATGCAAGAAAATGTAGTACAGGAGCTTCAGCAAATGCAGCCT GATGAACAAACCAAACATAAAATGTTGGACATACTGAAAAGATTTCATTCAGAAGAGGAAATGGATAGCATGGATGAGGATTCTTCTGCAGATTCAACTC TATCCGAGGAGACACTGGAAAAAGTTTTGTCCGGACAAGAAATCAGCTTTGATGATTTATCACTAGAAGAGAAGAAACAATTTCATCGAGCTATTGCTTA TGGGGAATTGAGCAAGATGATCAAACCATGGGATCCATGGTGGTCAAAGCCTTCTGCAAGAAAAATCCGTCTTAGTAGGGAAGGAACTCAACTTGTTCAA CCTCTTTCAGAGCAGGAACTGCCAGAGGATGAATCTAGCGACATTCCTCGTGGCCCTGAAATACGGCTTCCTCCCCTAAGCAGGCTTAGTCTGAAGGAGC CATCACCCCTTTTAACTGTTCACCTCGTTGATATTTTATATAGCTATTGCTTCACTCTTCGCCTCTACAATGGAGATTGGAAATCAGATGCCTTAGGGTC AGTCATGGTTGTACTGAGCGTGTCGTCAGTGTTGGGTCAAGGTGGACAGCCGGAGACTACACTGGAGTCTCTCTCGCATTGCTTGGAGCAGATTTGCTCT CCAGCTTATAGACACATGGGTGGACTGCAATTTGGGTTGAGTGTTGTTGATGATGTGATCAGCCTCCTTGCATTGGGAAGTTCTGCATTGGTCTGCGCGC TTTGTGATATGCATCGGTTGATTCAAGAAGGGGGGAAGGAAGCCAAATCAGAAAATCGAAGGAAGATGAGGAGGAATGAGATCAGAAGTACTATTAAGCT GGCAGAAAGGAAGATATATTTCATAATGTGTTGGGTTCATGAGCAGCCAGAGGAAGCTTGGTCTTCTCTAGCAGCCATTGTGATTGCTGAAAAGGCATCA ATCATGGAATCTCAAAGGAGTAACAAGGCTGAAAATTTGAACAATAAAACAGCAACCAAAGGCAAATGCATAATTGAGGAGATTCAATGATTTACAATGA CTCTCATACCCTTTTCTAGTGAATCCTTTATTTATCTATAATTTAGAGGGTAGGATTCAAATTGTTGTTGTACCCAAAGTAGTTACTTATAAACTTACTT TGACATAATAGAAGTCTTATTTTGGGCATGTTCAATCTGGGTAGTGGAGGCTGAGGAAAAAATATTGAAGAAGCCAAGGAGGGGTCTTGGAATTCCTGTG GTGCATGCTGAAAGGTGGGTGGATATTTTCTGTCCCAAAAAAATGTATCACTACATGTGTTACTGTTTATTATTAATCAAAAAATATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55008; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_268992
| Blastp | Zinc finger HIT domain-containing protein 2 from Mus with 25.38% of identity |
|---|---|
| Blastx | Zinc finger HIT domain-containing protein 2 from Bos with 23.44% of identity |
| Eggnog | zinc finger(ENOG4111VC9) |
| Kegg | Link to kegg annotations (29805) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434973.1) |
| Pfam | SHQ1 protein (PF04925.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |