| Id Trinity | FTRINITY_DN55857_c1_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_266745 |
| Sequence | ATTTTTCTTAGGTTTGAAACATGAGTAATGCTTTCAAAACCTGCTAACCCTATACCACATAAAGACAATAGCTTGGCAGGAAAATTTTAGCACATTAAAT TGGGAGTTTTTGGCCCAATATAATGAAGTATGTAGTCCAATCTGGTTCCTTTCAACCCAATCAGCTTAATTGTGAAAATGACCATTACCTAGGACTGTTT TTTGGGCCGAATATAAATGATCTTTTGAAGTCTAGTCTTATTGGTAAAAAACTTGAATCGAGATGGGTCACTGAGTAACCTATCTTGTCACCTTCAAGAA AGATAATTAGATAAGTCGAGCAAGATATGCAAGATAGCACAGTGGAGGCAAATGATATTGATCATTAGTTGTTAAAAACATAACGAAGCCCTTGTTAAAG CTACATTGATGAAATTTAAAGGGTGATTTTATTAGTATCATGCAAGTCTTACTCATATAATCCAAAGTTGTGAAGATAACTCATCCATCCAAAAATTAAA CAACTTTCAAATCTTTTTGACGGACATTCTTTAATACCCTTGCTATTAAGTATTTCCTTAAAACAATCTTGTGCCTGATATTAGAGTTGGGTTTTGGTTT ATATGTGATGCAGGTGATGTTGTTTGGTGCTAGTGATAGCTTCTCAGGAGATCAGATAATGCAAGTAACTTTGGCATTCAACCACTTTGGTAAGAGATTA ATCCAAAGGATGCCAAGGTGCAGATGGGGTTTCATCCATGTTGTTAACAATGACTACACTCATTGGGAAATGTATGCCATTGGTGGTAGCCAACGCCCAA CCATTATTAGTGAGGGTAACAGATTTATTGCCCCTAACAATATCAATGCTAAAGAGATAACAAAGAGGGATTATGCACCAGAAGAAGTGTGGAAAAACTG GCAATGGAGATCAATAAAAGATGAGTATATAAATGGAGCATTTTTCAGACAAGCAGGACCTGTTCTCACTAATAGGCCATTCACAAGGAAGGATATGATG TCATCTAGGCCTGGTTCATATGTAGGAAGGCTTACTCGTTATGCTGGCATCTTGAGATGTAGAGTGGGAAAGCCTTGTTGATTAAGTAACCTTCATTTGC CATTTTCTTTCTGTAAATCTTCATTGATGGAGCAGTGGCTTTAGCAAAGTAAAGGATACATAGAAAAAAGATAGGGTGCAAAGAAGATTGTGTCCTCTAT GATCTGTGTTAGTGCATTATTTTTCTTTGGTTATAGGGAGGGTGTGGAAAAAAGTACTTAAAAATGTAAAGATCTATGTGTCATTGATTCCATTTTGGAT TGAGAATCGATGTAATTAGAACATGTTTTTTACATTTGTTATTATTTGTAACAATCAAGTGTATTTATGCTTGAAATAAAATAGTTACTTTACTATGAGT GAGTACATTGTTATATTGTTTTTTCAAATTAACATGCAACATATGTTGTGTTCACTTACATGGATGTTTTTTTCTTTTAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55067; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_266745
| Blastp | Probable pectate lyase P59 from Lycopersicon with 62.42% of identity |
|---|---|
| Blastx | Probable pectate lyase P59 from Lycopersicon with 62.42% of identity |
| Eggnog | pectate lyase activity(COG3866) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454789.1) |
| Pfam | Pectate lyase (PF00544.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |