Id Trinity | FTRINITY_DN55863_c1_g1_i5 |
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Name Transcript | Ll_transcript_268504 |
Sequence | CTTAAACTCATTTTACTTAAAAGAGAATGAAACGTATCTGATTTGAACTAAGAAACCTCTTGTCTGATTCTTTTCATCTTACAACAATTGTATTATACTG TGTTACTCTATTCCCATTACCAATCCATTCCCCTCAAACACATAAAAACAATATCACCGAGAATTGTAACTAAATAATTTGATTCATGGCTTCAATAACT CCCACTGCTTCAAACCTCAACTTCCCTAACCACAAACTCTCTATCACTTTCCCTCTCACTCTCACAAAACCCTCTCTTCTTCAATTCCAACCCCAACCCC ACTCTCAATCCCTGTGCCGCTGCCTCACCTCCTCCTCCGCCGGCGACAACCCTCGATGGGACTCGCTTCTGCATGATTTCGTCACCAACGCCATCAAGCA ATTCGATTCCTACATTAACTCCCTCACCAACCGCAACGCTGCACAAGAAAAACGTGAACCGGAGGATAGCGGCGATGATGATGAAAAAGAATGGGATTGG GATCGGTGGCGCGTGCATTTCCAGGAGGTTGATGAACAGGAGCGTATCGTCTCCATTCTCAAGTCTCAGTTAAACCGTTCTGTGTATTTGGAGGACTACA AAGATGCTGCTAGACTTAAGGTGGCAATTGCAGCTGCAGCTACCAATAACAGTGTTGGAAGAGTGATGTCTCATCTCAATAGAGCCATAAAGGAAGAGCG GTACACTGATGCAGCTTTTTTAAGAGATAAAGCTGGTGCTGGACTTGTGGGCTGGTGGTCTGGTATTTCAAAAGATGTTAATGATTCACATGGTCTAATT ATTCGCATAACTCCAGAGCATGGAAGATATGTGGCAAGGAGTTATAGTCCTAGGCAGCTTGCAACATCTGCTGCTGGTGTTCCTGTATTTGAGTTTTTCC TTACAAAGGATAAGAGAGGTGCATTCAAGTCAAAGGTTGTGTACTTAAAGCGGAGAAGGGCCTTTCAAGGTTCCCCAACAATTTCCTCTAAAGCATTGGA TGCTGCTGATAGATTGAGTTCAGTCGAGTCAACGGAAGACCAAAGTCAATCATTTGTCGTGAGTACTGAAGATCTGGAAGGTGGTGATGATAGGAATGAT GGCTCTGATCCAACCGAGGGAATGCCTGGGTTTCAGAATGTCTTGAAAGATTTGATTCCTGGTGTGAAGGTGAAGATTTATGCGGTGACAACTCCAGAGA AAGTAGACAAGGATCTAATATCTAAGGTGGTTGAACAGATAATTGAGGAGGAAAATGAAGATGATGAAGATGAAGATGAAGAGGAAGATGAAGAGAAGGA CAATATAGAAAGTTCGGAACCAGAAGAAATTAAGTCTGAAACAGGCCAAGAAGGAAAAGATGAGATTGACATAAGTGCTGGTCTGGGAACTTTTCAACAT AAAGAACAGAATGATATTGCAGTCAAACTTGTCATTGGGGGTCTTGTTCAGAAACTTTCCAGCAATGTGTCCGCTAGAGATTTGCTTCGAGTTCCTGCTA AGCTGGAGATGAAGGGGCGTGGTTCGTTTTCCTTTACTGTTGAAAAAGAAGCAAACCAGCAGGATGGTGACGGCAAAGGGAAATCTTCATCAGATGAATC AACCAAGTTTCAAGGACGACAGAGAGTTGGTCCTGTTATGTTTGACCTTGCTAAGTTCGTTGGCCGGGGAAAGGTTCCCTCAAAAGTGCTGAGAGAGGTG GGAGAGTTAATAAACCTCACTCTAAGCCAGGCTCAGAACCATCAGCCATTATCTGGATCTACAATTTTCAATCGCATTGAATTACCAGCTTCATCGGATC CTTTAAATGGTCTGTATATTGGTGCACATGGTCTTTTCTCCTCTGAAGTCATTCAAATGAAACATAGATTTGGTCACTGGCAAGAGGATGGTGGGGCCAA GGAGTCTTCAGATCTTGAGTTTTATGAGTATGTAGAAGCATTGAAACTAACCGGGGATCCTTATGTACCTGCTGGCCAGGTGGCCTTTCGTGCAAAAGTT GGGAAGAGGTATCAACTTCCTCATAAAGGGATAATTCCTGAAGAGTTTGGAGTGGTTGCTCGCTATAAAGGTCAAGGGAGACTGGCTGAACCAGGGTTCA AGAATCCTCGATGGGTTGATGGTGAACTTGTGATTCTAGATGGAAAGCACCTAAAAGCAGGTCCTGTTGTTGGATTTGTGTATTGGGCCCCTGAGTATCA GTTTTTGGTCTTCTTCAATCGGCTTAGGCTTCAACAGTAGGGTGTCCTTGATCATAATACCAGAGAGTTGTAATTCTTTCTTCAGATTTTTAGCGTTTTG TTGAATGCTAAAATCTCATGCCTTAATGGAATGATATCATTAATTAATGCAGGGTCTTCCATTTAAGCTTTATAAGATTTTCACCACTAGCTTTCTTTCA AGCAGCATAGAATATGGGCATTTTGCTACTTGTTTTGTTCAAACTCGACTGACCGGGATATCCTAAGCATGTATGCTGTAATTTGACTAACTGGATTGGT GGGGGGTCATTATATCAGCACTAAAACCACCATGTACGAGTATCTCCATCCACTTATTATGGAGGGGCTCAGTGTATCTTTCATCAGCTTTGTATATTAT TTCTGATTTTCCTTCCAAATTATATTCGTGTTATAAACTCACAACCATGCATAGTTTTTATGTATTCAGGGTCAGTAACTCAGTATCACAATTCTTTCTA TTAAGATGAATGATCTTTTCATTACCCCAAATAACATTATTTTCTTCTTCTCACATTGCACAGTATTCATGCCGTTGGTGTTAGCTTCCTCATTAAATTT GTAATGGAGTAGGTGCTAGCGAATTGAATGTCCCTGAAGGGAATGTGTGCTTTCTATTGCATTTATTGAGACATCCTTAAACTTTTCTTGGAATGTATGT AAAAAGAAGAAATGTAGTAGTGGTATTGGAATGGAGTGAAACTTGTTTGGAAACATGAGGATATGGAGGAAAAGAAAATGAGGTTAATAATCTTTAGGCA GGGAGGAACGAGACGGGTTAGGGTCGGGTTTGCACATACCCGAATCCTAATTCAATGGGTTTGAAATAAAGATACTATCACCGAACCCGTTGATACCGTT GATATTATTTTTTAATGAAAGTATTGTATTATTTTCGTTTCAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_55109; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_268504
Blastp | Protein EXECUTER 1, chloroplastic from Arabidopsis with 51.91% of identity |
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Blastx | Protein EXECUTER 1, chloroplastic from Arabidopsis with 52.16% of identity |
Eggnog | protein EXECUTER 1, chloroplastic-like(ENOG410ZHAF) |
Kegg | Link to kegg annotations (AT4G33630) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423479.1) |
Pfam | Domain of unknown function (DUF3506) (PF12014.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |