Id Trinity | FTRINITY_DN55869_c8_g1_i4 |
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Name Transcript | Ll_transcript_267309 |
Sequence | GTTGGGGTCCATGCAAATAATGAACCTGTCTTCACATTCTCTCTTCAGAACCAAGCTTCTTTTTTCTCCCTATCTCTTCACTACCCTCTTAGCCTTCATC TTCTTCACTGCAATCTTCTATGTTCACCATTTCTTTATCTTTTCTCAACTCACACCCTTCTCCACATTCCATAACTTGACTCAGTTTCCTAGTCAAGAGA AGAGCAATGTGCATAAGGTAGCATTTGCAGTAGAGGAAACAAAGGAAAGGTGTGATGTGTTTAAAGGAAGGTGGGTTAAGGATGAGTTGGCTCGACCATT GTACGAGGAATCGGAGTGTCCGTACATACAACCACAGTTAACTTGTGAACATCATGGGAGGCCAGATAAGGACTATCGGCATTGGCGGTGGCAGCCACAT GGTTGTGATCTTCCCAAATTCAATGCCAGTTTGATGCTGGAAACGCTTCGTGGGAAGAGGATGATGTTTGTCGGAGACTCCCTTAACCGGGGTCAGTATG TCTCTTTGGTATGTCTTCTCCATAAATTAATTCCTGAAGATGCCAAATCAGAAGAAACCTTTGATTCACTCACTGTCTTCACAGCCAAGGTACTAGGCAT CTTTTGCTACTCTTAGCTTATGCACATTTCACAACTTAACAGTTTTTTGTAACATTTGGTGTAATAGCTCTTGTGAGTTATGACAGTTATGGAGAGTTCT TTAATACTTAGGAAGCAATATGTTATAATAGTAACCATGAATCATGATATGATATTGGAGTTATATATGTGGTCATAACATGCTTTATTTCATTAGTCTA AGAAAAATTAGTATTGTTCATTAGTGAAAATTATAGAATATGTAAGGTGTTTTTTATTGGAAATCATTTGAGAAGAAAAGTAATTCATAATTGTTTTTCA TTGATTATAATCAATAAGGTTACACACTTATATAGACACTACAAAGATAGCTTGCAAATGAAGCAAAAGAAAATAGCTAACTCTAATTATCAATAACTAA GTTACTAACACTTTAACACAATTCTACTCATGTCAATTTGAGTGTTCTGCTACAAAATCCATCATTCTAGAAGTCTCATAGAAATTGGCCAGAACACAGG CCAAGTGTGCCTTGACACTTGCCTTGGTATGCCTGGTGCCTGCCTGATGCGTCTGGCGCCTAGTGCGTGCCTGACTTGCTTTCTGGGATGGTCTCCGGCA CAGTCATGGCTTGTACCTGGCACTGTATGCCTTAGTTTCTGGCACGGTCATGGCTTGTGTCTAGCGCACTCTGGCGCGGTCATGGCCTATGTTTGGCTCG GTCATTACCAGCCTTGGCCAAGTGACCAAGCTCCTTCATTCCTTCATAATTTTTAATTCTCATATAGTTTATCTAAATACCCTGTTAATAATAACAAAAA AATTTATAGGGTGTCTCTTTTATTATTCTTCTAATATAACATTTAGCTACATTACTATGCCTAGCTATTTTCTCTTTGTTCATGTTGCTACATTTACTTA GGAATACAATGCCACAATTGAGTACTATTGGGCACCTTTTCTTCTTGAATCAAACTCCGATAATGCTATCATCCATAGGGTCACTGATAGGATTGTGAGA AAGGGTTCAATCAATAAGCATGGCCATTATTGGAAAGGTGCTGACATTGTAGTATTCAATACTTACCTTTGGTGGATAACTGGCTCCAAAATGAAAGTCT TGTATGTTCCTCCACTCTATTCAACTCATTGATATTTACTTAGCCAACAATCTTTTAAATTGCGGCCGCGATTACGGCTGTTGCGATGCAGATTGCAGCC ATTGCAGTATGAATTATTT BLAST |
Tissue | flowers |
Gene name | LI_gene_55228; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_267309
Blastp | Protein trichome birefringence-like 33 from Arabidopsis with 65.03% of identity |
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Blastx | Protein trichome birefringence-like 33 from Arabidopsis with 66.88% of identity |
Eggnog | leaf senescence related protein(ENOG410ZJIP) |
Kegg | Link to kegg annotations (AT2G40320) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416820.1) |
Pfam | PMR5 N terminal Domain (PF14416.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |