| Id Trinity | FTRINITY_DN55870_c0_g5_i8 |
|---|---|
| Name Transcript | Ll_transcript_267778 |
| Sequence | GCAAAAGCCATAAAGCTAAAAGTGTGCAAAAGCCATAAAGCTAAACGTGTGTAAAAGCCACTCGCTTCTACTAGTGCCAGTGTCTTGTGTTAGTGTAGAG AAAACGTTTGAGAAAGAAACAAGCTTTATTCTCTCTTCAACCCTACACCGCCCAAGATTGAACGAAAATGATCGATTTTTCTCGCGTTCAGAAGGAGCTT GTTGAATGCAGCAAAGATACTGAAGGATCAGGCATCAAAGTTACCCCGAAAAACGACAACCTTGTTCGTCTCAATGGAACCATTCCTGGCCCTACTGGAA CTCCCTATGAAGGGGGTATTTTCCAAATTGACATTACTATTCCAGATGGGTACCCGTTTGAGCCCCCAAAGATGCATTTTACAACCAAAGTTTGGCACCC TAATATCAGCAGCCAAAGTGGAGCTATTTGCCTAGACATATTAAAGGATCAGTGGAGCCCAGCACTCACTCTGAAGACTGCACTTCTTTCTGTGCAAGCA CTTCTCTCTGCTCCCCAGCCTGATGATCCTCAAGATGCTGTTGTGGCACAGCAGGTCTGACTCGTGCTTTTCTGTGTAGTTGTGTCTCTACATCATATGA AATATTATTTCTTATGTACTTTGTGTGTAGAACTGTCAATGCACAGCATATAGAAGAATTTAATACTTTTGTGGGTGAGCCTCAGTGCAATGGTAAAGTT GTTGCCTAATGACTTGAAGATTATTAGTTCAAATCCTGGACACAACCTTTCCGTTCGTGGAGGGTGCGGTTGTGTATGTATTAGATCCCTAGATCCCACT AGGTGGGAGTCTTGCACATTGAGTTGCCCTTTTTATGTGGTTGTTAGAGCAACTGCTGTTAATATTGCTTATTTTTCATAAGTTCTTCCGTCATTCTAAA CCAGTGTCTCTTAATGGACAATGTAGTATCTGAAAGATTACCAGACATTTGTTAGCACTGCTCGTTACTGGACAGAAAGTTTTGCCAAGACATCTTCTCG CGGGGTTGAAGATAAGGTACCCACTAACTTGTATTTATACCATAATACCATTGCAATTTAGAATTTTAGATGCCACCAATTAGCATATTTTAATTGGTCT TGTCATTGTGTAACATTCTTTCACATTCAAGATGGACTTTCTTTAGTAGTGATCTAGTCAATATTAATTTACCAGACAGTCCTTTTATGATAATTTTAAA GGAAAATGATAAACCTAACTTTTTTATTTGTAATCAATCCTAACCATTGATTGTATGTATCCTCTATTTTATACTGAAATTAAGTTTTCATTTTAAAAAA TGTCCGGCATTGACATGCATAACTAGTTTAAGAAATTTGGATGAAGTTTACATTTAAGAGCAAAATCATGATACTTAAGCTACTTATCAATTATTTTAAT TTCCATTTCTATTGCATCAGTTATCACCAGCTGAGGGTACCTTATCTGTGGCGACTTGTCAAACATTTTTTAGCTGTTGTATGTTATAATGTTTGAAAAG TCATTTAATATAATTATTAAGCAATAATTGATAGACAACTTAGCTTAGTTAATGCTATATTTCCAAAATAGATCAATTATGGACTTAATCCCTGAATTTG TGTTCTGTGATTTAACAAAACTTGCAATTTCTATTTATTTGGAACAGGTACAGAAACTTGTAGAGATGGGGTTCCCTGAAGCTCAAGTTAGGAGCGTTTT GGAAGCTGTTGGTGGTGATGAAAACTTGGCTCTTGAAAGGTTGCTGTAATCTATCTGGGAAATATCAACTAAAGTGTTTTGAGCATTGTTGGAACTATTT ATAGACACAAAGGGTTAATTGCATATAAACTATGATTTACTTGAGTCATATGGTATAGTATTTTTGTTGGATCCTGCCTTCTTTATTCTCTTTGGAATCT CTGGTAATCAACATTTTCCAAATGTTATAGAATGTATGGAATTAAATTAAATACCTTGTTGACAATGTTTGTGCTTCATGGATAAATTATTTGAGACAAT GTTGATGGTTTTTTTGGAATAACCAAGGTATCCTCTCACCTTTGGGTAAAGAATTAATCCCTTTCGAGGTATGTGGTTGTCTTTCCTAATAAGTGTCGCT TCAGGAATCGAACCCTTGATCTTTTGGTCATCCTGAGATCTAACAGAGCCTTACGCCACTAGACCAATATCTTGTTGGCTGTTATTATTTCCTTGTACTT GTTTTTCTGATAGTAATATTGTTTTTTTATGCAGTCAGGATGTTGTAAGCCACCAACAGCATGCACATACAAGATGGAAACATTGGTGAACCAAGACACT GATTGCTATAAATGGAACAATGCTCCCACTTTGCTATGCTATGAGTGTGATTCTTGCAAAGCTGGTGTACTTGAAGAAATGAGAAGGAATTGGCACAAGC TCTCTGTTCTAACTGTGGTCATGCTTGTATTTCTGATAGGGATATATTCCATTGGGTGTTGTGCTTTCAGAAACACAAGAAGAGCTGAAACTGATTATCC ATATGGTCAAAACAGAATGACCAAAATCAGACCCAGATGGGATTACCATTGGTGGAGATGGTTCCATGACAGGAAAGAACAACTTTATTAAATAAGGAAG CTCTAGCCTCCCCATCTATGGTTGGGTAAATGTTACCGAATAAAATATCTACTTGTATCAGAAGATAAATTGTCTACTTAAATTTATTGAACATTTGACA TGTGTTTATTTTATCTTTTTATATTATAGAGAAAAGGAAAATAAGACATATGTCAAATGTTAGGTAAATTTAAGAAAACAAGATATCTCTTGATGTAAAG AAATACTTTATTCCCGTCTTACAAACATATTTTCTCAGTGGATGGGAATAGAAGGTTTCAAGGCCTTTGCTTCTAAATTGATTGCTTTTTTGTACATAAT AACTTCATTTTGCTTTAATCTCAAACATCATAACAAAACCCTTATTTTTATTATGCCTTTTTCTCTCTCTCTAATTAGTAGATAGCTTTAACTTTTATTA CATAAAGTCTGTTGAATTATGTGGCATGGGATTGGAGTGAAGAGGCACCATAATCCCACTTGCTTAGTTGCTCTTTTAGTCATAGACAGACACAGTGATT CTATAGGTAAAAATAATGCAAGATGGCACAAGTATAAGAGATAGGCACCATTAAAAATAAATTAAGATATTGGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55242; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_267778
| Blastp | Ubiquitin-conjugating enzyme E2 27 from Arabidopsis with 81.4% of identity |
|---|---|
| Blastx | Ubiquitin-conjugating enzyme E2 27 from Arabidopsis with 81.58% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT5G50870) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441942.1) |
| Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |