Ll_transcript_268430

• Id Trinity: FTRINITY_DN55872_c0_g1_i16
• Name Transcript: Ll_transcript_268430
• Sequence: AAAAATAACATGAATTTTTGTTGCCCATGAAAGACACGATCCTCTCCTCCTTGTGCATTTTCTCCTCCTTTGTTTCTCTCTCTTCCCTGTGTTCTTTCTC TCTCCTCTTCCCTGTCCACCCTTCCGTTACCGATTGTGATCAATTTCTGCATCCTTCAGTTTCTTTCAACGGTAATTGGGGGTTTCTCCATCAAAGTTTA AACTTTTTTGCTGCAAACTCTGTTTTTTGTGGCAATCTAGGGTTAAATTATCTCCATTTTCCTTTTTTCCGATGAAAGGAATGAACTTGCATTCTTGGGT CGTCACCACATTCACCGGATTATAATTTATGAGTTTTTTCTTTTAACCCCAGTAATAAATTTGACTTGTTAATGTAGAAAAGGTTAAAATTTTATTTTGT TGTGAATTTTCAACAGAGTTGATTTTGGGGGTGTTCCTGGTATGTTATATTAGTCTCTGAAATTTGGAAGCTGCAAGCTTTTGTTTTGATGATAATAAGG ATTAATTTACGTCAACAAATCTCTACACTATGGATCAGATAACGGATTCTGAAATGGATCAACGGAGGCAAGGATATTTCCATTCTGAGCCCGGTGTTGT TTCGAGAGGATCCGCGAGTATCTCACAGCCGAATATCCGCACAATGGTGGCAGCTTCAGGGACCACAACCAATGTCAATTCCTACTATTTACAAGATTCT CATGACAATACTGGGGTGTATGGCTTGGCACAATACAATGGCATTCAGCCTCAACATAATTTTGACATGGGTGGTGCTGCTGCAGCCAACATATATTATT CCGGCATGAATCCTTCTTCTAGTACTGGCGTATTTACCACTTTACCTCTAAACCACCAAGCCTCTGATCAATTGCCTGGTTCGAACACATTTGCGATCTC TGGAGGTTCTTCAGATAGTTTTGGAAGAAACAGCAGCTTTGTGGATGATGTCAGAGGTGCATACAAAATGAAAATTGCTGAAGGGGTAAGAGGAAATCAT CAGTATTTTAATGCTTCAGCTAGTTCTTCCGTTGTGCCCCCTAATGCAAGACATGCCGATGGGATTGCTATGGACACTGCATCATTTTCCTTGCACAGGC CTTCACTTGTGGAAGTAGGACAGCATGGTGGTGGATGGAACAGGTCAGGTGAGTCTATTATGATGCATGACCAAAACCATTTGATTCGAGGAAACTACTT AGGTCAGCACTTTCCGCCAGCTCCTCGTCCATGGTTTGACCAGCAGTTAAACAATGATGGCCATACTACAGCCTGGAATCAGCCTCTTCCAATGCCTTAT ATGCAAGCACCAAATGTTAATGGAAGTTCATTAGAGAATGCAAGTATGGGTTTGCAGAGATATCATGATACAGCCAACAACAGAAATGGTCTCAGGTTTC CTCATCCCCCTCCTGCCAACCACCCACACCATAATTATCTTCATCCGCCACTACCTATGCAAGGAGTGAGAGGTCATGCTATCAACTTTCACCCTCCGGC AACTGCAGCTTCATTTAGAGTTCCTACAAATCCTTCACGAGGTGCTGTGATCCCCCCACAGACTGGTTTTGAGATGATACCTAGGCATGTTGGTCCTGTA CCGTCAGCAGGCCTAAGGATATACCGACCTCACAGATCAATCATGCCCGATACAACTCTCGGACATAGAAATCTTCCCCCCATGGGCTTTCTCCGAGTTG ATGATGGTGCTTTAATTGACGAAGTGGGAAATTTGGTTGACCATCACAGAGATATGCGCTTGGACATAGAGGATATGTCTTATGAGGATCTTCTTGCTTT GGGTGAGCGGATTGGCAAAGTAAGCACTGGTTTGTCAGAGGAAACAATTTCAGCTCAATTGAAGACGAAGACTTATTTAACACATGCTACCGCTATTAAT TTGGAAGAGGAAGTTTCTGATGATCAGGAATCTGATTCTTGTATGATATGTCAGGATGAATATAAGGATGAAGAGAAGATTGGAGTTCTTCGATGTGAGC ATGAGTATCACGCAGATTGCTTAACGAAATGGTTGCTCGTAAAAAATGTCTGTCCTATATGCAAATCAGAAGCCTTGACCCCTGAAATGAAGGACATAGA GAAATGAATGTAGCCTATATCTCTTTCTCATCCTCCCTATGCCAATCTTGGCTAATTTATTTTTGAACAGAATTCACATTTTGTTGTGTCTTTTTTGTAA ATCTACTTGCACATATATAGACAGTTACAGTGTCCAACTCATTTACTGTTGGCATCAGAACTTTTGTATGTATGAATTTGTACAGACTTTGTTTTGTTTG GTGTATTAACTTCAGGTAATTACACTATTACTGTTTATGATTTATTATTTTGATTGATATTTATGGTTGGAACTTTGAAGTGTCATGATTAAAA
• Tissue: flowers
• Gene name: LI_gene_55266;
• Additional information: details;

Expression of Ll_transcript_268430

FPKM

• FPAB: 3.9
• FPNAB: 3.5
• LF1: 3.7
• LF2: 5
• LF3: 3.1
• LF4: 2.7
• UF1: 3.4
• UF2: 3.3
• UF3: 2.6
• UF4: 3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_268430

• Blastp: Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 29.39% of identity
• Blastx: Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 38.76% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425908.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;