| Id Trinity | FTRINITY_DN55872_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_268416 |
| Sequence | AAAAATAACATGAATTTTTGTTGCCCATGAAAGACACGATCCTCTCCTCCTTGTGCATTTTCTCCTCCTTTGTTTCTCTCTCTTCCCTGTGTTCTTTCTC TCTCCTCTTCCCTGTCCACCCTTCCGTTACCGATTGTGATCAATTTCTGCATCCTTCAGTTTCTTTCAACGGTAATTGGGGGTTTCTCCATCAAAGTTTA AACTTTTTTGCTGCAAACTCTGTTTTTTGTGGCAATCTAGGGTTAAATTATCTCCATTTTCCTTTTTTCCGATGAAAGGAATGAACTTGCATTCTTGGGT CGTCACCACATTCACCGGATTATAATTTATGAGTTTTTTCTTTTAACCCCAGTAATAAATTTGACTTGTTAATGTAGAAAAGGTTAAAATTTTATTTTGT TGTGAATTTTCAACAGAGTTGATTTTGGGGGTGTTCCTGGTATGTTATATTAGTCTCTGAAATTTGGAAGCTGCAAGCTTTTGTTTTGATGATAATAAGG TACTATTTGTTATCTGTTCTTTTAGTTTGTTTGGTGGATCATGATGAACTAGGGATGTTATAGATTAAGTACTTTCTTGTTTTGTTTGGACCCTGAAAAG TAGCTAGAAAGAAGAAAAAAAGTTTTTTTGAAGCAATTTTCGGCCCGTCGATTTTTTAGTTTTTTATGCACACATATGTTCAATGATTCCTACAATTCAA TTCATAGGGCTCTAAAATTCATTAATTTAGACTTACATATTTTCATGATTATATGGTCACTTCTAGTATGTCGCGTGTTCGATCCACGCTCACCGCACTT CTAATATGTCGCGTGTTGTTGTTTTATTTTTATTTTTTGTCTTTAATGTTTGTTTTTGAATGCAACCATATTTGGCTCAACTTTGCTTTCTCTTGAAATA TAAATCTGCATCTTTCATGTCCATTTAATGTATCATAAGTAATTTGTCCAAGGGTCTGGTTAGTTACTGCCTAATGTTGATAAGGAATGTATGCCACTTA GCACTGATACTTAAATGGTTGTCGTGAATTCTTCGATGCTTTTAAGATGCTTGTCGTTTATATGTATTTCAACTAATTTATGAATTTTTTCCATATTAAC TTATTTGTATTGTGCCGTATCCACGTCAGTGCTTCTTTGGCTATACACCCTTATTTTCTTGTGCTGAATGTTTGCTTTGTTGTTTTTATCTAATTGTTAT TATCTCCTTATGAGTCTGATTTATGCATTCATCTTGCCTGGAATATTAGGATTAATTTACGTCAACAAATCTCTACACTATGGATCAGATAACGGATTCT GAAATGGATCAACGGAGGCAAGGATATTTCCATTCTGAGCCCGGTGTTGTTTCGAGAGGATCCGCGAGTATCTCACAGCCGAATATCCGCACAATGGTGG CAGCTTCAGGGACCACAACCAATGTCAATTCCTACTATTTACAAGATTCTCATGACAATACTGGGGTGTATGGCTTGGCACAATACAATGGCATTCAGCC TCAACATAATTTTGACATGGGTGGTGCTGCTGCAGCCAACATATATTATTCCGGCATGAATCCTTCTTCTAGTACTGGCGTATTTACCACTTTACCTCTA AACCACCAAGCCTCTGATCAATTGCCTGGTTCGAACACATTTGCGATCTCTGGAGGTTCTTCAGATAGTTTTGGAAGAAACAGCAGCTTTGTGGATGATG TCAGAGGTGCATACAAAATGAAAATTGCTGAAGGGGTAAGAGGAAATCATCAGTATTTTAATGCTTCAGCTAGTTCTTCCGTTGTGCCCCCTAATGCAAG ACATGCCGATGGGATTGCTATGGACACTGCATCATTTTCCTTGCACAGGCCTTCACTTGTGGAAGTAGGACAGCATGGTGGTGGATGGAACAGGTCAGGT GAGTCTATTATGATGCATGACCAAAACCATTTGATTCGAGGAAACTACTTAGGTCAGCACTTTCCGCCAGCTCCTCGTCCATGGTTTGACCAGCAGTTAA ACAATGATGGCCATACTACAGCCTGGAATCAGCCTCTTCCAATGCCTTATATGCAAGCACCAAATGTTAATGGAAGTTCATTAGAGAATGCAAGTATGGG TTTGCAGAGATATCATGATACAGCCAACAACAGAAATGGTCTCAGGTTTCCTCATCCCCCTCCTGCCAACCACCCACACCATAATTATCTTCATCCGCCA CTACCTATGCAAGGAGTGAGAGGTCATGCTATCAACTTTCACCCTCCGGCAACTGCAGCTTCATTTAGAGTTCCTACAAATCCTTCACGAGGTGCTGTGA TCCCCCCACAGACTGGTTTTGAGATGATACCTAGGCATGTTGGTCCTGTACCGTCAGCAGGCCTAAGGATATACCGACCTCACAGATCAATCATGCCCGA TACAACTCTCGGACATAGAAATCTTCCCCCCATGGGCTTTCTCCGAGTTGATGATGGTGCTTTAATTGACGAAGTGGGAAATTTGGTTGACCATCACAGA GATATGCGCTTGGACATAGAGGATATGTCTTATGAGGATCTTCTTGCTTTGGGTGAGCGGATTGGCAAAGTAAGCACTGGTTTGTCAGAGGAAACAATTT CAGCTCAATTGAAGACGAAGACTTATTTAACACATGCTACCGCTATTAATTTGGAAGAGGAAGTTTCTGATGATCAGGAATCTGATTCTTGTATGATATG TCAGGATGAATATAAGGATGAAGAGAAGATTGGAGTTCTTCGATGTGAGCATGAGTATCACGCAGATTGCTTAACGAAATGGTTGCTCGTAAAAAATGTC TGTCCTATATGCAAATCAGAAGCCTTGACCCCTGAAATGAAGGACATAGAGAAATGAATGTAGCCTATATCTCTTTCTCATCCTCCCTATGCCAATCTTG GCTAATTTATTTTTGAACAGAATTCACATTTTGTTGTGTCTTTTTTGTAAATCTACTTGCACATATATAGACAGTTACAGTGTCCAACTCATTTACTGTT GGCATCAGAACTTTTGTATGTATGAATTTGTACAGACTTTGTTTTGTTTGGTGTATTAACTTCAGGTAATTACACTATTACTGTTTATGATTTATTATTT TGATTGATATTTATGGTTGGAACTTTGAAGTGTCATGATTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55266; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_268416
| Blastp | Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 29.39% of identity |
|---|---|
| Blastx | Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 38.76% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425908.1) |
| Pfam | RING-H2 zinc finger domain (PF12678.6) |
| Rfam | tRNA (RF00005) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |