| Id Trinity | FTRINITY_DN55872_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_268418 |
| Sequence | AAAAATAACATGAATTTTTGTTGCCCATGAAAGACACGATCCTCTCCTCCTTGTGCATTTTCTCCTCCTTTGTTTCTCTCTCTTCCCTGTGTTCTTTCTC TCTCCTCTTCCCTGTCCACCCTTCCGTTACCGATTGTGATCAATTTCTGCATCCTTCAGTTTCTTTCAACGGTAATTGGGGGTTTCTCCATCAAAGTTTA AACTTTTTTGCTGCAAACTCTGTTTTTTTGTGGCAATCTAGGGTTAAATTATCTCCATTTTCCTTTTTTCCGATGAAAGGAATGAACTTGCATTCTTGGG TCGTCACCACATTCACCGGATTATAATTTATGAGTTTTTTCTTTTAACCCCAGTAATAAATTTGACTTGTTAATGTAGAAAAGGTTAAAATTTTATTTTG TTGTGAATTTTCAACAGAGTTGATTTTGGGGGTGTTCCTGGTATGTTATATTAGTCTCTGAAATTTGGAAGCTGCAAGCTTTTGTTTTGATGATAATAAG GTACTATTTGTTATCTGTTCTTTTAGTTTGTTTGGTGGATCATGATGAACTAGGGATGTTATAGATTAAGTACTTTCTTGTTTTGTTTGGACCCTGAAAA GTAGCTAGAAAGAAGAAAAAAAGTTTTTTTGAAGCAATTTTCGGCCCGTCGATTTTTTAGTTTTTTATGCACACATATGTTCAATGATTCCTACAATTCA ATTCATAGGGCTCTAAAATTCATTAATTTAGACTTACATATTTTCATGATTATATGGTCACTTCTAGTATGTCGCGTGTTCGATCCACGCTCACCGCACT TCTAATATGTCGCGTGTTGTTGTTTTATTTTTATTTTTTGTCTTTAATGTTTGTTTTTGAATGCAACCATATTTGGCTCAACTTTGCTTTCTCTTGAAAT ATAAATCTGCATCTTTCATGTCCATTTAATGTATCATAAGTAATTTGTCCAAGGGTCTGGTTAGTTACTGCCTAATGTTGATAGGAATGTATGCCACTTA GCACTGATACTTAAATGGTTGTCGTGAATTCTTCGATGCTTTTAAGATGCTTGTCGTTTATATGTATTTCAACTAATTTATGAATTTTTTCCATATTAAC TTATTTGTATTGTGCCGTATCCACGTCAGTGCTTCTTTGGCTATACACCCTTATTTTCTTGTGCTGAATGTTTGCTTTGTTGTTTTTATCTAATTGTTAT TATCTCCTTATGAGTCTGATTTATGCATTCATCTTGCCTGGAATATTAGGATTAATTTACGTCAACAAATCTCTACACTATGGATCAGATAACGGATTCT GAAATGGATCAACGGAGGCAAGGATATTTCCATTCTGAGCCCGGTGTTGTTTCGAGAGGATCCGCGAGTATCTCACAGCCGAATATCCGCACAATGGTGG CAGCTTCAGGGACCACAACCAATGTCAATTCCTACTATTTACAAGATTCTCATGACAATACTGGGGTGTATGGCTTGGCACAATACAATGGCATTCAGCC TCAACATAATTTTGACATGGGTGGTGCTGCTGCAGCCAACATATATTATTCCGGCATGAATCCTTCTTCTAGTACTGGTGTGTTTACCCCTTTGGCTCTA AATCACCAAGCCTCTGATCAGTTGCCAGGTTCGAGCTCGTTTGCAGTCTCCGGAAGTTCTTCAGATAATTTTGGAAGAAGCAGTGCTTTCATGGATGACG TCAGAGCTCCATACAAACGGAAAGTTGCTGAAGGGGTCAGAGGAAATCACCAGCATTTTAATGCTCCAGCTAGTTCTTCCGTTGCTCCCCCTAATGCTAG ACATGCTGATGGGGTCGGTATGATGGATAACGCATCATTTTCCTCGCGCATGCCATCACTTGTGGAAGTAGGACCGCACGGTAGTGCATGGAACAGATCA AGTGAGCCTATTATGGTGCATGACCACACCCATTTGATTCGTGGAAATTATTTAGGGCAGCATTTTCTTCCAGCTCCTCCTCCATGGTTTGAGCAGCAGT TGAACAATGATGGCCATACCACCGCCTGGAGTCAACCTCTTCCAATGCCTTATTTGCAAGGACCAAATGTTAATGGAAGTTCATTAGAGAATGCAAGTAT GGGTTTGCAGAGATATCATGATACATCCAGCAACAGAAATGGCGTTCGGTTTCCTCATCCGCCTCCTGCCAACCATCCACACCATAATTATCATCATCCT CTGCTACCTATGCAAGGAGTAAGAGGGCACAATATCCACTTTCACCCTCCGGCAACTACAGCTTCATTTAGGGTTCCTGCAAATCCTCCACGCAGTGCCA TGATCCCTGCACAGACTGGTTTTGAGATGGTTCCTAGGCATGTTGGCCCTGCTCCCTCAGCAGGCCTACGAATATATCGACCTCATAGAGCAATCATGCC CGATGCAACTCTCGGACACAGAAATCTCCCCTCCATGGGATTTCTCCAAGTGGATGATGTTGCTTTGATCGATGAAGTGGGAAATTTGGTTGACCATCAC AGAGATATGCGCTTGGACATAGAGGATATGTCGTACGAGGATCTTCTTGCATTGGGTGAGCGGATTGGCAAAGTAAGCACTGGTTTATCGGAGGAAACAA TTACAGCTCAACTGAAGACGAAGACCTATTTAGCACCCGCTACCGCTATTAATTTGGAGGAGCTACCTTCTGACAATCAGGAATCTGATTCTTGCATAAT ATGTCAGGAAGAATATAAGGACCAAGAGAAGATCGGAGTTCTTCGATGTGAGCACGAGTATCATGCAGATTGCTTAAAGAAATGGTTGCTTGTCAAAAAT GTATGCCCAATATGCAAATCAGAAGCCTAGACTTCAGGAAGGAATGATGATGTATAGAAATAAGTGAAGTCTTCACCTCATTCTCATTCTATGCTATTCT TGGCTAATCTATTTTTGGACAGAGTTCATATTTTGTTATGTTTTTTGTATATGTAAACTTGCACATATATAGACAGTTACAGTGCCCAACTCATTTATTT TTTGGCATCAGAACTTTGTATCTATGAATATGTACATACTTTGTTCTGTTTGATGTATTAACTTCAGGTAATTATATCATTGTTGTTTATGATTTATTAT TTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55266; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_268418
| Blastp | Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 46.36% of identity |
|---|---|
| Blastx | Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 46.15% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443904.1) |
| Pfam | RING-H2 zinc finger domain (PF12678.6) |
| Rfam | tRNA (RF00005) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |