Id Trinity | FTRINITY_DN55874_c1_g1_i5 |
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Name Transcript | Ll_transcript_267168 |
Sequence | AACTATCTGATTATTATTTTCAATTTTAGTGCCTGCAATGAACGCACAGCATGTAAAGAGTTGATATTTGTGAATTTTTAGCAGTGAATAGTTATGGGTG GATTTTTGGGTAAATTATGTATAGTTTTTTTGTTATCAGGCACACAGGTTAATGAGGTTATGGTTTTGTTCTTAGTAAAAAGGAACTTTCTTTTCTCTCT CCTTACCCCGTAGCATTCATTTGTTTATTTTGACGAGAAAAATTATGAGTGGTTGAGAAGAATTTATGTCTTGTTTCTTCTTTTTCTCTTAAATTCCTGT AATGGGTTGGTGTAGGAGGAGGTTGCTGTGTTGTCATGCTTGATTGAAATTTGCAAAATGAGTGATTCAAAAGAAAACGAGGAAGGCTGCCAGAGCATGC CCGTGGCCATGGAAGAAAGCCACCAGTTGGTTGATTCAGAGGTTCAAGTTGAACCCAAAGAACCTTCATCTAAAGATGCATTAAATCACGTGGAAACCGG AAAGGAAGAGCCTCTCGCCGAGGATGAAAATGTTAAGGCGGGGAAGGCAGAGCCTCACACCGAGAATGAAAATGTGAAGGCAGGGAAGGCAGACCTTCTT GCTGAGGATGAAAATTTGAAGGCAGGCAAGGCCAAACCTATTATGGAGGAAGAAATTATGAAGCCAGGTGAGGCAGAGTCGATTGCTGAGGATGAAAATG TGAATCCAGGGAACACAGAGCCACCTGTCAAGGATAACAGCAAGAAGCCAGTAAAGGCACAAGTACCTATTGACGATAAAAGTGTGAATCCAGGAAAGGT GGAGCCATCTGCTGAGGATGATAGCGAGCAGCCAGTAAAGATAGAGCTTCCCGTTGAGGATAAAAGTTCGAATGCGGAGAAGGAAGAGCTACCTGTTGAG GATAAAAGTTTGAATGCAGAGAAGGAAGAGCTACCTGTTGAGGATGATAGTCTGAAACAAGGGAAGCTAGAGGTACCTGCTGAGGATAACTGTGTGGAGC CAGAATCTGTTTTAGGGGACATTCGTCAACAAGATGTTCAAAATACTCTTCAGTCGGCCTCAGTTGAGTTTGATACTCCGATTTCAAATAAAATTGAGTG TGAAAAGGCTTCTAATGCGAATGCGAAAGCTGATGAATTTCCTCAGGGTAATATGGACGTCAAGAATGATGGTAGCAGTTGTCGAAATAATGTTGATGCT GCTGAGACAATGATGGAGGTGAAGCCTGAAGCCCATGAAGTGATTGATAGTAAAACTTGTGATAATGTGGACAGCATAGCCAGTCATAATGAGCCTACTA CACCACAAGCTGTTCCGACAGATACAAAAGCTGAGATCAAGAATGAATTACAAGTTGCAAATAAGGGTGATGGAGAGCAAGCTGTTGAACCTGGAGATAA TGGGAACTCGAACTCAATGCAGATATCCTTCTTGAACGCTGACCATTGTTATGATGGTAATGAGTCAGGGACAGATGAGGAGCAATCAACTTTTATGAAG GAGCTTGAAAATTTCTTCAGGGAAAGGAGCATGGAATTCAAACCTCCCAAATTTTATGGAGAAGGACTCAACTGCCTTAAGTTATGGAGAGCTGTGATAA GATTGGGTGGCTATGATAAGGTAACCTCATGTAAGTTATGGCGGCAAGTGGGAGAGTCTTTCAAACCTCCAAAGACATGTACCACAGTTTCATGGACTTT TCGGGGATTTTATGAGAAGGCGCTTCTTGATTACGAAAGGCATAAAATACAAGTTGGCGAGTTGAATGTGCCTATTGC BLAST |
Tissue | flowers |
Gene name | LI_gene_55278; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_267168
Blastp | AT-rich interactive domain-containing protein 3 from Arabidopsis with 80.34% of identity |
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Blastx | AT-rich interactive domain-containing protein 3 from Arabidopsis with 80.34% of identity |
Eggnog | At rich interactive domain(ENOG410Y2AP) |
Kegg | Link to kegg annotations (AT2G17410) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445144.1) |
Pfam | ARID/BRIGHT DNA binding domain (PF01388.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |