| Id Trinity | FTRINITY_DN55875_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_267547 |
| Sequence | AATAAAACACAGCCCAAGTTAAACCATCAACTACCTTCAACACTGAGTTGCAGTATTTGAATGAAGAATGGTCGCAGAGTAAAGCCTCCAACTTTGTGAT CCTTTCTCAGTTACCCACCTTACCCAAAACCTTCAAGCATTGCCTCCACTGAATGATGTTATGGCACAGAATTTGAATATACTGAGAAGGGTTTTGGCCT ATAGAATCTTGAACCATTTCTATGCTAACCATTTATCATGTCCTGCAAGATATTTTGCTCATGCTTCTTATTCAACCACTGATTTTAGAGTTCAATCTGA GGGTAGTTGTAACATTAGAAATATCAATGATAAAAATGATGGTTTTAGGAAAGTGGGTTCTGGGTTTCAAGGGGATTTAAGTTTTGGTGCAAGTATCAAT TATGATGTAGAAGATGAGGGTGATGGTGATGAAGTTGGTGAAGAAGAGGGTTCTAGTGATGATGAAAGTATTGAGCTTATCGGTTCCTTTCGTGGAAATC ACAAACAGAGAGAAAATATTGCAAGAGTTGAGATTGATGAAAATGAATTTAGACACCCTTTGGTGAAGGAGGTTTGTAGGTTAATAACTCTCAGGTCTGC TTGGAACCCTAATCTTGAAGGACAATTGAGGCATGTATTAAGAAGCCTCAAGCCCCCACATGTTTGCGCCATTTTGCGCTCACAAGTTGATGAACGGGTT GCTTTGAATTTTTTCTATTGGGCTGATCGGCAGTGGCGCTACAAACACAACACTATTGTTTACTATACACTGTTAGATGTCCTAAGCAAGACTAAACTGT GCCAGGGTGCTAGGCGGATTCTTCGCCTTATGACCCGCCGGGGAATTGAATGCCCACCTGAAGTTTTTGGCTATGTAATGGTATCTTATAGTCGTGCAGG GAAGTTGAGGAATGCCTTGAGAATTTTGACCTTGATGCAGAAAGCTGGAGTTGAACCTAATTTATCTATATGTAATACTGCCATCTATGTGTTGGTGAAG GGAAATAAATTGGAAAAGGCTCTGAGATTCTTGGAACGAATGCAGATTACTGGAATCGAACCTGACATTGTAACTTATAATTGTTTGATCAAGGGTTACT GTGATTTACATCGGAGTGAAGATGGATTGAAGCTTATTGCAGAAATGCCGTCTAAGGGTTGCCTTCCTGATAAAGTAAGTTATTATACCGTGATGGTTTA CTTCTGTAAGGATAAAAAAATTGAAGAGGTGAAGCAGTTAATGAAAAGCATGGTTTCGGATAGTACATTAATACCAGATCAGGTTACGTATAATACACTT ATCCACACGCTTTCAAAGCATGGGCATGCTGATGATGCTCTTAATTTCTTGAGGGAAGCAGAAGACAAAGGTTTCCACATCGATAAGGTTGGGTACAGTG CAATAGTTCACTCCTTCTGTAAGGAGGGGAGGATGGACGAGGCAAAGAGTTTAGTGAACAATATGTACTCAAGGGGTTGTATTCCTGATGTGGTGACATA TACTGCTATTATCAACGGATTTTGTCGCACGAGGAAGATAGATGAAGCGAAAAGGATGCTGCAGCAGATGTATAAACATGGGTGCAAGCCAAATACTGTT TCTTATACAGCTTTGTTGAATGGCCTCTGTCACAATGGAAAATCATTAGAGGCAAGGGAAATGATAAAGGTAAGTGAGGAGCATTGGTGGACCCCAAATG CTATCACATATAGTGCTGTGATGCATGGGCTCCGTAGGGAGGGAAGATTGTTCGAAGCCTGTGAATTGATTAGGGAAATGGTTGAAAAGGGTTTTTTTCC AACACCAGTTGAAATTAACCAGCTAATACAGTCTTTCTGTCGAAATAAGGAAGTGGTAGAAGCTAAATTATTTTTACAAGAATGTCTGAATAAGGGCTGT GCCGTCAATGTTGTAAACTTTACTACTGTAATTCATGGTTTTTGTCAGACTGATGACTTGGAAGCTGCTCTATCGATGCTAGATGACATGTATTTAAGCA ATAAACATCCTGATGCAGTCACGTACACAGCACTGGTTGATGCATTGGGGAAGAAAGGTAGATTGGACATGGCTTCTGAGTTGATCATCAAGATGCTCAG CAAAGGTTTGGATCCTACTCCTGTAACATACCGGACAGTCATACACCGTTATTGTCAATGGGGTAGAGTGGGTGAGATGTTGAAATTATTGGAAAAAATG CTTGTTAGGCAGCCGTTTGGAACAGTATACAATCAGGTTATCGAGAAACTTTGTGCTTTTGGAAACCTTGAAGAGGCCGACAAGCTTCTAGGTGAGGTTT TGAGAACAGCATCGAAAGTTGATGCTAATACATGCCATGTTCTGATGGAAAGCTATCTGACTAAAGGGGTCGCTCTGTCAGCATATAAAGTGGCGTGTCG GATGTTCAGCCGGAATTTGATTCCAGATTTAAAGCTCTGTGAGAAAGTGAGCAAGAAACTGATGTTAGAAGGGAAGTTGGTGGAGGCAGATAACCTTATG ATACGACTTGTTGAACGCGGAATACAACAAAATGAGATACATAGCGAAGTTAGCCGCTATTCTAAGCTTAAAAGTTAAAGAATGGTCATGCTTATCATTT TCCTATGTTGGCAATCCATCTTCAGCTCTAAAAAGAGCTATAAATGTAGGGATAAGCCTTTATCAATTTCAAGTTCATTTCCAGATTTCTCTCTTTTATG GTTACAATGATATGCATAGCATTTTCCCATCATCTATTAAGAAATGTAATGTGAAAAGGAATTTAGGACTAGGATTGTCATTTTATATTGTTTAGATGAA TTGATATTTGATAAAAGAGACAAAATGAATGCATTGTTTAAAGAAGTACATCAATCAGATGTTATGATAATTGTGATAATTGTAACCAATTACATCACAA TTAGATTGATGTTATACATTGCTTCAAGCATTGCAATGTCCATCAAGTTAGTTGTAAGCAGATACATCTTTTTTAAATAAACAATGGTGCTATCAGTTTC AGATGCAATGAGCTCTGTTACAATGACATTAAAACAACTCAAATTATTGCAGTTACAACGATTACTTCCGAAGGAATATGCTCCGAAGAATGGTATCAGT GCTAGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55289; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_267547
| Blastp | Pentatricopeptide repeat-containing protein At5g39710 from Arabidopsis with 28.74% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At5g39710 from Arabidopsis with 29.13% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT5G39710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439669.1) |
| Pfam | PPR repeat (PF01535.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |