| Id Trinity | FTRINITY_DN55876_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_268890 |
| Sequence | ACCAAAACTTCATCCCATTCCATTTCACAGCAAACCCAAATCCTCTCTACACTAAAAAATGCAAACCCCAACATCAAACGCCGAAGCGGAGCGGCGAATC CAGACACTAACCCAGCACCTGAACCCTCTTCCAAGCCACCTCCTCTCCGCCACGAACCACCACTTAGCCATAGAACCATGCGCCGCAAAAACGAAGCTGA ACGTGGACACGTCATCCCTCACTTCATACATGAGTGGAAAACACAAGGACATACAAGAAAAAGTGATCAACTACTTCAACGCAAACCCACACCTTCAAAC CCCAATTGAGATATCAAAAGATGATCATCGCGAATTATGCATGAAACAACTTCTGGGTCTTGTCAAAGATGCTGGATTAATGCCTTTACATTACGTTCTT CACGATCCTTCTACCTATTTTGCCATATTGGAAGCCGTTGGTAGTTATGATATGTCGCTATCGGTTAAGATGGGTGTGCAGTATAGTTTATGGGGTGGCT CTGTTATGAATTTGGGAACTCAGAAGCATAAGGATAAGTACTTTGATGGCATTAATAACTTGGACTACCCGGGTTGTTTTGCTATGACCGAGCTTCACCA TGGTTCAAATGTGCAGGGCCTCCAAACTGTTGCCACTTTTGATCCAATCACCGATGAATTTATCATTGATACGCCTAATGATGGTGCCATCAAATGGTGG ATTGGCAATGCTGCAGTGCATGGAAAGTTTGCCACTGTTTTTGCCAGGTTGAAGTTACCCACTTATGACACAAAAGGAGTTTCTGATATGGGTGTCCATG CTTTCATAGTTCCAATAAGGGATATGAAGACCCATGAACCACTTCCTGGAATTGAGATACAAGATTGTGGTCATAAAATTGGCCTCAATGGTGTGGATAA TGGAGCATTGAGATTCCGATCTGTGAGAATCCCCCGAGATAATCTTCTTAACCGTTTCGGAGATGTCTCTCGTGATGGGAAGTACACAAGTAGCCTTCCT TCTGAAAATAAGCGGTTTGCTGCAACTCTCGGGGAGCTTGTAGGTGGTAGGGTTGGCCTTGCATATTCTTCGGTTAGTGTCCTGAAGGTTGCTGCTACAA TTGCCATTCGATATTCTCTACTTCGTCAGCAATTTGGACCTCTAAACCAACCGGAAGTCAGAATTCTTGATTACCAGTCCCAACAGCATAAGCTAATGCC AATGTTGGCTTCAACTTATGCATTTCACTTCGCCACTACAAATTTACTGGAGAAGTACTCTGAAATGAAGAAAACTCATAATGAAGAGTTAGTTGCAGAT GTCCATGCTCTTTCAGCAGGTCTAAAGGCTTATGTGACATCATATACTGCAAAATCACTGAGCGTCTGTAGGGAAGCCTGTGGAGGCCATGGTTATGCTG CTGTTAATCGGTTTGGTAGCTTGAGGAATGATCATGATATTTTCCAGACATTTGAAGGAGACAACACGGTTCTTCTTCAGCAGGTTACTACTTATAAGCC CACATATATCACCTCTGATAGAGACTTTTATAGCCATCCTTTTGGTATGTTATTACCAAAATAATATAGGAAAGAAGGACCTCCAAATTCAGCCATGAAT CTGTGACTAATATTTCTATCTTCTACACCAAAATGTAGACTGTAGAAAATAGTATACCAATCAGCAGTGAGATTCAATACAAATAGCAGCACAATAGAAA GCTGCAATTCGCTAGCCCTTAATTTGGTTCAAGATGCCCCTTTAACCTTGATCTATCAGTCCTCTTTCCTCCTGTATAACTAAGGCACATTGCGTATTAT TTGCATTTGTCTAAAATTAGCTATTAGTAAAACTTCTTTCGGTCTTGCTTTTGATAACCTCCAAATGAAAAACCAAGCTATTCTGTTAAAGGAATGAATT AAATATGGGTTGATTGCTGGTACATGGATGCATTTGCATCATTGCATGCATATTTGATATGTAGGATCGCAGGAAATATTTCTTCTTGTTTGGTGGCAAC CAGCAACTTTAACTTTACAGCTTTAGGATGTGGGTTATGTTTTGTTTTCTGCATTATCGGTTATCCTTTGGTTCTTGTATTCTTTTACTGGAAGCGAAGT TATAGTTTTGAAAATTTCCTTTACAACTGAAGGTTGCAGGTGACCTTTTGAAACAATATCAAAGAAAGTTCAAAGGAGGGACTTTTGCAGTGACATGGAA TTACTTGAGAGAATCCATGAATACATATTTGTCACAGCCAAATCCAGTTACTGCTCGGTGGGAAGGCGAAGACCACTTACGAAATCCTAAATTTCAGTTG GATGCTTTCAGATACCGAACATCAAGGTTACTTCAGAGTGTTGCTGTAAGACTTAGGAAGCACTCTAAATCTCTCGGGAGCTTCGGTGCATGGAATAGAT GCTTAAATCACCTTTTGACACTTGCAGAGTCACATATTGAGTCAGTCATCCTTGCTAAATTCATTGAAGCTGTGGACAGCTGTTCTGATCCAAGTTCTCA AGCTGCTCTGAAGCTTGTTTGTGATCTTTATGCTCTGGATCGAATATGGAATGACATTGGAACATACCGTAATGTTGACTATGTGGCTCCAAATAAAGCC AAGGTATAATGTTAGTTTTGTTTCAAATAAAGTTGATATAGTTTTCTTTTAAATTTAGTACACAAGTGAACAAAACAGGCATTCCATTTCACTTCATTCC CCTCCAAAACACTCGCAAACATACCCTTGATTACTAATGGACTGTGGGTAGTAGCTACTATCATGCTATGGTTCTGAAAAAAATCAGGTGTAAGTCTGTA ACTAATAAAAACTTGGATTAAAACATATGTGCAGTTTTCACACTTTGATTACATCTGTTTATGTTTCTTTTTCCTAATACCTCTAATGGTGCCATTGTAT CTAGTTTTTTCTTGATCTTTTGAACATTGTAATCTTAGTATTATCGAATATTGAAGTTTTCTCATTTCACAGGCAATTCACAAACTGTCAGAGTATCTGA GTTTCCAAGTGAGGAATATTGCGGGAGAACTTGTTGATGCATTTGATCTTCCTGATCATGTTACACGAGCCCCTATTGCGATGCAGTCAGAAGCATACTC ACAGTACACACAACATGTGGGATTCGAATAAAGAATGGCCACAAAGAAGATTTGTGTTTGGAGGAAATGGAATTAACATGGAAAGTGATTTTTTTACCTC ATTGTTGAAATTGTAGTTTGTTAGCAGTGGCTGCAACAGCTAAATGAACAACAATGCACATGAGGTTTCATTACTCATGAAAAAGGAAAAATACTTATAG TCAGCAAGTGCATTACATGTATTATTTTATTCTTGTGGGAAGCTGTGAATACATATATTGAATGGAAATTATTGCTCAGTTTAAGCATAGAATATAATAT CCCTTTCTTAAGGCAATGTAGATGTGAAGACATCTATAATGGAATGCAAACTTAACAAAAAATGATGAGAATTAATCAATTGACCTTTGCTTCTTCATGC CAATGGATACTTTTTCACTGGCAGAAAAAATATGGGATAAAGCTTTATTTGTTATGTGTTGTGTTCTTTTTAACTAATCTCTCTCAAAAGGTAAAGAGCT ATGTTGTGTAATTTTTGCTTTAATTAAGCTATCAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55297; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_268890
| Blastp | Acyl-coenzyme A oxidase 2, peroxisomal from Arabidopsis with 80.64% of identity |
|---|---|
| Blastx | Acyl-coenzyme A oxidase 2, peroxisomal from Arabidopsis with 80.64% of identity |
| Eggnog | acyl-CoA dehydrogenase(COG1960) |
| Kegg | Link to kegg annotations (AT5G65110) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459535.1) |
| Pfam | Acyl-CoA dehydrogenase, middle domain (PF02770.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |