Id Trinity | FTRINITY_DN55882_c0_g1_i9 |
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Name Transcript | Ll_transcript_267692 |
Sequence | TTTTGTTTCTTTTATGTACAAAAATCTCAATTTTTATTTTTACCAATCTTCATCTTCTTAGCTTTTACCATAAGATAGAAGTTGCAAGTTAAAAGTAGAG TTCATATTATAAGTTCATTACATAACGTTTATTCTGTTCTGTGTTGACCAAAAAGGAATAATCCACGCCACCACGTTTTCCATCGAGATCGTGACGGTGC CTCTTCGTCCTTCGCCGGAATAGGGGATCCGCCACCGTCTCGTCCAACTCCCTCAAATCTAAACGACGACGTTTCCAGATCTCACATCTATCTATTTCAA TAACAGTTAAGGTTTTGTAACGTGAAGAAGTGATCGATAGAGAATTAAGGTGAATTTGAATTGAAAGAGTTGGTGTCGTTTCTGCAGAGCGAAGAGAATT GTAGAAAAATGGATGTGAATATCAACAATTGGTATAAGGAGCTCTCATATGATGAATGGGTACCAATCCCTGTCTCTGGTTCACGTCCACTTCCTCGCTA CAAGCATGCTGCAGCAGTAGTTGATGAAAAACTGTACATTGCTGGTGGGAGTCGTAATGGTCGGCACTTATCTGATGTTCAGGTTTTTGACCTTCGAAGT TTGACATGGTCTTCTATTAGACTAGAAGCAAATGCTGGAGAAGATGATGACAGTAGCTCACAACAGATTCATCCTCTCACATCCGGTCACAGTATGATTA GGTGGGGGGAGAAACTACTTCTTCTTGGTGGCAGCTCAAAGGGTTCTTCTGATAAACTAGTGGTTCGATACATTGACATTGAAACATGCCAGTTTGGAGT TATTAAGACTTCTGGAAGTGTTCCAATAGCTCGTACGGGACAGTCTGCGACACTGGTTGGTTCAAGAGTGATATTGTTTGGAGGAGAAGACATGAGCAGG AAGCTGTTGAATGATGTACATGTTCTTGATCTGGAAAGTATGACTTGGGATTTGATAAAGACTACGCAGGCACCTCCAACTCCTAGATATGATCATGCAG CTGCTGTACAAGGAGAGCGGTACCTTCTGATTTTTGGTGGTTGCTCTCATTCTATCTTCTTCAATGATCTTCACTTATTAGACATGCAAACAATGGAGTG GTCCCAACCACAAATTCAAGGAGATTTAGTATCTCCCAGGGCTGGACATGCTGGTATCAATGTTGATGGAAGCTGGTTCATTGTTGGTGGTGGAGATAAC AAAAGCGGTTGCCCCGAAACCTTGGTGTGGAACATGTCTAAGCTTGTTTGGTCGGTTTTAACTGTTGCGAAGCAAAAAGATCCGCTTTCTAGTGAGGGTC TTAGTGTTTGCTCAGCAATGATTGGTGGAGAGAATCATTTATTAGCTTTTGGTGGCTATAATGGGAGGTATAGCAATGAGGTATGTGATGTAACCTTTAT TTTTAAATTTTAAATTGTCATTGGAAGATATGCTTTCTTAATTTATTTTTGTCAGGAAGGACAACTTAAGGTTTTTAAGCTTGCATCATACTTTAATTAA AGATTTTTCCTTTTCTTCTTGGTGATGATTCATATATATACCTCTCAGCCTTATATTTGAGAGGTCAATTTTCATCCATTCTATCCATTGACGAAATTTT ATTCTTGGATTGGTCTTATTTGCAATGTGCTGACATTGTTTTGCTTAGCTGCTTGAGTGCTTGCTTGTTTGCTTCAGTTTCAGCAACTGGTTCCAGACTT CCAGACTTCCCGCTTGTCTGGACATGCATGTTTGTTCATTTGGGTATACATGCCTTACTTGTTAGCCTCTATTATAGACTTGGAAAAAAAAATTAAGTGT TCCAGACTGGCTGCTTGTTTGGATGCATGCTTATTCATTTGAGCTTAACTGGCAGACTGAGTTTTTTGGACTTGCTGCTCTCTCATGTGAATACTTTGCA GTGAATTAGCCAATTAGGTCCTTAAGAATAAGGGGGTAGATAATCGTGAAGAAATTGGGGTGCATTGGAAAGGAACGACTTCAAAATGACATCGTGTGGT TCACACGAGACTTGGCAGGAGGTGTATTGTGTGATAACATAGCAAACCAGATGATGTGCCAATTTTGTACTACTTGGGCAAAGTGATTTTGAGTTAAATT ACATGGGGTTGAACCATGAGATTCAGAGTTTCAGACAAAGTTTCACATTTTGTAATGTGATAAGGTTGTATTTTTAGTTGATTGCATTAAATTGCCCTAG AAACAGTAAGGAAAAATTAAGAAGAAGATCATTAAGAAAAAAATGATCAAATGAGAGATAATCCAATTGAAAGGGGTAGAGGGTGGCCTAAGAAATTTTT AGCAGAAACCATACAGAAAGACTTTTCAGTAAAAAAAGTTATTGAAAATATTTGGTATTTAATATTTGTTGAACCCAATGGTATCCATTATCCATGTAGC ATCTAATGGGATATGCCTTGGCTGTTATATCATGTAATTGTACATTGATTGAATTGGACTACTCTACATGACTTTTTTTATGGCACATTATGCCATAAAT TCTAAATTTGCTAGCTTTACATGTTTTAAGTACACTTTTTCAATTAAAAAAGTGTGCTATTCGATGGTTGATGCTTCCCTTTCAAATTTAGGTTTTTGTT TTGAGGCCCAAGGCAAGGGACTCCTTGCGTCCCAAGATTTTCCAATCGCCAGCCGCTGCCGCTGCAGCAGCTTCTGTGAGTTCTGCTTATGCATTATCTA AATCTGAGAAGTTGGATTTCATGCAACTAGATGATATAAATTCCAAGCCATCTGTAAATGGCCATCCTCTAGATGATGTCACAGTTAAAAGTGAGGCCAT TAAAGAAGAAAAACGGTTATTGGAATTGTCAATTGCAGAAGTCAGGGCTGAAAATTCAAGGCTCAGAGACGAAATAAACGAAGTAAATAGTACTCATACT GAGTTGACCAAGGAACTTCAGTCAGTCCAAGGACAACTCTTGGGTGAAAGATCAAGATGTGTTAACCTGGAGGTACAATTTCACTTCACTTTTTTTAGGT ATGTTATGGTTTTGTGGTTGTGGAGGATTTCGGTATAGTAGTAGTGTTTGTTTGCAGGCTAAGATTGCAGAACTCCAAAAGATGCTGGAATCAATGCAGT CTGTGGAAGATCAAGCACGGGCTCTTCGTAATCAAAAGTCTGCCCTGGACCAGGAAACGGAGCATGCTGCAACTGTTCAGCGGCAGAGTTCTGGTGGTGT TTGGCGATGGCTTGGTGGGGGTGGTGAGAGCGATGCCAACTAAAATTGATTTCGGAGTGGAGTCCTGGGACTTCAACTTTCTTATAAGCAACAGATTGTA TTGATTTATTTTGGTTCAATTGATTGTATTATTAACTTTTGCGTTGAAATTGAAATGCATGACCAATAAGATGTTAAACTCCAATTTTGAAGGGTTGATC TAAAATTTTCAGAGATGGGTATTGTATATAAGCTTTTTATATTTAGTACTTGAACAAGTTTATTTTTCTGTGATTCATTTCATGGCCATGTGTCCTTAAA TTGTACAGGACATACTTTTATTATCCCATTTATTTAAGTATATATTGAGTATAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_55335; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_267692
Blastp | Acyl-CoA-binding domain-containing protein 4 from Arabidopsis with 51.28% of identity |
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Blastx | Acyl-CoA-binding domain-containing protein 4 from Arabidopsis with 51.28% of identity |
Eggnog | Kelch domain containing(ENOG410Y5WM) |
Kegg | Link to kegg annotations (AT3G05420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441006.1) |
Pfam | Kelch motif (PF13854.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |