Id Trinity | FTRINITY_DN55887_c0_g1_i11 |
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Name Transcript | Ll_transcript_269417 |
Sequence | CTCCTATTGCCACCTCTCTGAAAATGGCCATTACTTCACCATCTCCATTTTCTTCTTCTCCATTCTCACTCTTCGTCCTTTCTTTCTGAATCTCAACATT TCCATTCACCAAATCTTCAAAAACTACTACTGCGAAAATCTCAGCCAATTTGAGCATGCTGTCCAAGTTTGGAAGTGACGGTTTCTGATTTCTGTTTCTC CTCGTAAGTCTCCGATTTTGAATCACAATCAAGAGCAGAAAGTAAAGTGCAGAACATCAGTTGGAAAAGCTTTTCTTTATCATTCAAGAGGAATGGCAGC ATCAGTCAATATTGGTCTTTCTGAAGAAAGATTTGGGAAGCGATCGATTGAAAATGGGGATTGCACTTCTCCTACCCGGTCCATGTATAAGCGGCGTAAA ATTTCTGCAAATCGTGATTTTCCAGAGGGATGTGGACCATTGGCTTCAAATGTTGATCCAATTTCAAAGGTAGATGTCACTGATTTTGTTTCAGCTAATG GTGCAATTGTTGAGGATAAGAATGATCAACATTCAGGGGATGTTACCGTTAGAACTTCCAAGTGTAAAGATGATTCTCAGCATTCCGTGTTAAAAAAAGA TTCAATTCTTACCGAATCTCTTCGCCAAACAACTGACTGTAGTTTGAAGAATAAAAATCCAGTGGTTGCATCAAATCATGCGGATGGGCTTCCTTTGGCA AATGATGAGTCAACAACAGTGGCATCCGTGGGTGCAGAAGCTATGGAAGATACAGGGTTGACCCTTGGCCAAATAACTGTCTGTAATCTGAAGAATGAGA ATCCAGTTCGCCAAACAGCTGACCATAGTTTGAAAAATGAAAATGCAATAGTTGCTTCTCATCATGTGGATGGTCTTCCTTTGGAAAATGATCCTGCAAA AGTGTTGGTTGGCGTGGATGCTCTGGAGGATACAGGGCTGACTGGAATTGCGAACTCCGTGAAATGTATGTCCTCTATGCCAAAGTCACCCTCTCCAATG GATGGGGTGGCTTTGTCAGGTGGTTCAAAGTCCTGTTGCAATGGCAATGTATCTGGTTCCAGTGGTTGTATTGAGAAGGCTATGACTACAAGATATGCTC CTCAAAGAAAACTTTCAGCTGTCAGAGATTTCCCCCCTTTATGTGGGCGCAATGCTCCACGTCTCGGCAAGGATGAGCATCTAAATAAGATCTCTTTGGA TAGCAAGATACCGGACATGGCTGTAGATGACAATCCATTGAAAAAAATAATAGTCACTGATGTGCAGGAGAAGGACAAAAACTTTCAATTGGAAAATGCG TGCAAGAGAAAGCTTGTGGATGTAGGTAAACCTGATTCTGAAAGTACTGCCACAAAGAAAGTGAAGAAGATGGATGCATTTGAACATCCGCAAGAAAGTA ATCATGAAGTTGTAATAAATTTTAAGACAGCTGTTGAAGAGGAAAATCAGGATGCTGTACAGGATGAAGAAGCGTCAGGGCTAGCAATTATAGCTTGCCC AGAAGTCCAAAGTCCCGAGGCAAAGCCTTTAGATATGTCTACTTGTCAGCATGAGTTGAAAGGATCTTTTAGTGGATTGCAGGTTTCATCAGATAGGAAA GTGGTGCTAGGTTTGATATCTGATAAAGATTCTTCCATATCTAAAATGTTTGGTGATAAAGATGGAAGCACGGGAAAGAAAGGTGGTTTCTCTGCACACC CTGACAGGTCTAAAGCTACTTTGAAGTGTAAAGATGCACCAAATCAGTCTGGGCAGAAGCCATTGAAAAAGAAAAAAGAAAATCCTGCTTCTGATGATAT GGGTCAATTAGTAGTGTTTGAAAAGGATTCTCTTGACCCCAATGAAAACATCGATGACTTTCAGGTTGTCCCTAGATCACATGGTCTCAATGTAAATGTT CCTCCTTTTGGTCATGCTAATTTTGGTTGTCATGAGAATGACTCAACTGTGACCCGAAATACAGTCAGGGAAACATTACGCCTGTTTCAAGTTGTCTCTA GAAAGATTTTGCAGCAAGTAGAAGGTAATTCGAAAGGGCGAGCAAATAATTCCAAGAGGGTTGATTTACAAGCGGCCAAGATCCTTAAGGAGAAAGGGAA ATATGTTAACACAGGCAAGCAAATATTGGGATATGTCCCTGGGGTTGATGTTGGTGATGAATTTCAGTATAGGGTGGAGCTTAATATGATTGGCCTTCAT CGCCAGAGTCAGAGTGGTATAGATTATTTGAAGCACAATGGTAAGATCCTTGCGACTAGTATTGTTGCATCAGGGGGCTATGCTGATGAGGTGGATAATT CAGATGTCTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCCCTGATAAAGAACCTGAAGATCAGAAGCTTGAGCGTGGAAATCTTGCTTTGAAGAA TAGCAGTGAGGTAAAGAATCCTGTTAGGGTGATACATGGCTATGAATCGATGGATGGAAAGTCCAAGGCATTGGTTTATGATGGACAATATCTGGTTGAG TCATATTGGCAGGAGATGGGGTCACATGGAAAGCTGGTCTATAAGTTTCAGATGCGTAGAATCCCAGGTCAACCTGAGCTTGTTTTCAAGAAACCCAAGA AATCTAAGATGTGGTTTTGAACACTAGGACTAGGTAATCAAAATGATGAAAATCTCCTTCCTGTAAAACTTCATCTATATTTGCACTAATGAGATTTGCA TCTTTGAAAAAGTGAACATCGATATAAGTTTAGGCTTAAATGTAATTTTAGTCTCTCAATTGGAAGATTTGATGAAATTAGTTATACACGTTCCAATTTC ACTACATTTGAGTCATCC BLAST |
Tissue | flowers |
Gene name | LI_gene_55372; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_269417
Blastp | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 from Arabidopsis with 59.83% of identity |
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Blastx | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 from Arabidopsis with 59.83% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT2G22740) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421210.1) |
Pfam | SAD/SRA domain (PF02182.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |