Id Trinity | FTRINITY_DN55887_c0_g1_i7 |
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Name Transcript | Ll_transcript_269412 |
Sequence | GTTTGAATATATACAGCGAATTTGTTTTTGTTACTTCTGGTTTCTGACTACTAGATAATTCCCATAACCATCATGATAGGTACCTAAAGATTTGTAGTGA ACTTCAATAGGAGCTTCCCTTGTTGAAATAACGCGTTTATCTAGTCGTCACATGAGCCACAAAGGACTGTCTAAATTGATTCTTTTCTGTCGATAAGCTC CAATTACGTCATGGTAGCATCTGCCAATTTTGGCCATTCTGAACAAAGGCCTGGGAACCGGTCAATGGAAAATAGGGACTGCTCTTCTCTTTCACGATCT ATGTATGAACGGTGTAAAGCTTCTGCTATCCGTGATTTCCCAGACGAATGTGGACCATTTGCTTCAGGTGTTCATCCACTAGTGAAGGCATATATTGCTG ATATTGGTCCTGCTAAAGGTACAATTGTTGAGGATAATTATGGTGGACATTCAGGGGATTATACTATTAAAACTTCCAAGTGTGAAGATGATTTTCAGTT CAAAAGAAATTCAATTCCTACCGAGTATCGTTACCGAACAACTGACTGTAGTTTGAAGAATAAAAATTCAATGGTCTCATCTCATCATGTGGATGGTCTC CCTTTAGAAAATGATAATCTTGCTGAAGTGACATCGGTTGGCATGGAAGCTTTGGAGGATACATGGTTGACAGGAATAGTGAACTCCGTAACATGCGAGT CCTCTATGCCAAAGTCATCCTCTCCAGTGGGTGAGGTGGCTTTATCAGGTGGTTCAAAATCCTTATGCAATGTCAATGTATCCGGTTCCAGTGCTTGTAT CGAGAAGGCTATAACTAGAAGGTATGTTCCTCAAAGAAAACTTGCAGCTGTCAGAGACTTTCCCTCTTTTTGTGGACGCAATGCTCCTAGTCTCAGTAAG AATGAGCGTCTAAAGAAGTTTTCTTTGAATAACAAGAGAGTGGGTCAACACAACTCAGCTGTAAATGGCAATCCATTGAGGGGAAAAGTGACCACTGTTA TGAAGGAGGTGGAAAATCATACTCAAGATGAATATGCATGCAAGAGAAAGCTTGTGAACATAGTTGAAGCTGATCCTGAAAGGAATGCTAGAAAGAAAGT GAAGAAGATTGATGTATTTGAACCTTCTGGGATGAATTTGACTCAGGAAAACTCGAGAGAAAGGTTACTCAGACTTCCTCAAGAAAGTAATCATCGTCCA GTTGAAATTGGAGCAAGAAAGAAAGTTGGTTTTTTTGAATGCCTTGACAGGTCTAAATCTGCTATCAAGAGAAAAGATGCACCAAATCTTTATAGGCATA AGCCATTGAAAAAGAAAATTAAAAGTGCTACTTCTGATGAGATGGGTCAGTTAGTAGGTTGGGATAAGGATTCTCTTGAACCTAATGAAAACATCAAAGG CTTTCGAGTTGTCCCAAAATCACATGGTTTCAATAGTGTAAATGTTGGTGACTCAAATGAGATGCGAAATAAAGTGAGGGAGACATTAAGCATGTTCAAA GCACTTTGTAGAAAGCTTTTGCAGGAAGTAGAAAGTAAATCAAATGAGCGAACAAATAGTCGTAGGAGGGTAGATTTTGAAGCGGCAAAGATCCTGAAGG GGAGAGGGAAATATGTTAACTCAGGCAAACAAATTTTCGGATCGGTCCCCGGGGTTGAAGTTGGTGATAAATTCCAGTACAGGGTGGAGCTTAATATGAT TGGCCTTCATCGCCCAAGTCAGGGTGGTATAGATTATACGAAGCAGAATGGCAAGGTCCTTGCAACTAGTATTGTTGCATCAGGGGGTTATGCTGATGAG CTGGATAATTCGGATGTCTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCACTGCTAAACAACCTGAAGATCAGAAGCTTGAGCGGGGAAATCTTG CTTTGAAGAACAGTAGTGAGGAAAAGAATCCTGTTAGGGTGATTCGTGGCTCTGAATCAACAGATGGAAAGCTAAGGAGATATGTTTATGATGGACAGTA TGTAGTTGACAAATATTGGCAAGATATGGGACCACATGGTAAGCTGATTTTTAGGTTTCTGCTGCAAAGAATCCCAGGTCAGCCAGAGCTTGCATGGAAG GAAGTGGAAAAATCTAAAAAAATAAAGTTAAGAGAGGGTCTACGTGTTAATGATATTTCTCATGGGAAAGAGCGAATTCCGATATGTGCTGTGAACACCA TAGATAATGAAAAGCCTCCTCCATTTAAATACATTACTAGAATGATATATCCTAATTGGTGCAATCCTATTCCTCCGGAAGGATGTGACTGTATTGACGG ATGCTTCGACAAAGAGAAATGTGCTTGTGCAGCGAAAAATGGGGGAGATATCCCATTCAATCACAATGGAGCTATTGTAGAAGCAAAGTCTTTAGTCTAT GAGTGTGGACCTTCTTGCAAATGCACCTCATGCTACAATAGAGTCAGCCAACTGGGCATAAAGCTTCAGCTTGAAATTTTTAAAACCGAGAAAAGAGGGT GGGGAGTGAGATCTATAAACTTCATCTCTTCAGGAACTTTTATTTGTGAATACACAGGAGAGCTTCTTGAAGAGAAAGATGCTGAACAAAGAACTGGCTC TGATGAGTATCTTTTTGATATTGGGAATAACTACAACAATCATACTTCTTCAGATGGGGCTTTGGCTGTTATACAACAGGATACACAGTCGGCTTCTTTC GAAGTTGTGGAGGGCAACAGCTTCACCATTGATGCAGCCGAGTATGGTAATCTGGGGAGATTCATCAACCATAGTTGCTCTCCTAATCTCTATGCTCAAA ATGTCCTGTACGATCACAATGACGACAGGATTCCTCACATAATGCTCTTCGCTGCTGACAACATTCCTCCCTTTCAAGAGCTAACCTATGATTACAATTA CAAGATAGACCAAGTCTTTGATTCTGATGGAAAAATAAAAAGGAAGAATTGCTACTGTGGTTCTGTGGAGTGCACTGGTAGGATGTATTGAGACTTGACA AAGATTGTGGTTGTTGCTTATGGTGACTACTCTAATAGTAAAGCAGAAATTATGAAAAACATGTTATCTCATCTGGAAAAGGAAAATGTTTTTACTAGAG TAATGCAATATGAAGATTTGTCTAATGGTGCAAGTGGTTCAGACAGTAGTCTAAACTCTGAAGTCTCTTTTCACACTTTCTCTCTCTCTTAAATTCTGTT TTCAATCTTCCTTTATTGTTTAGAGTGGAATTTGTACCTTTCATATGGTACTATCTAGCATAACTCTTTTTACTATATGCTTATTTTATTCCTTGGATTA TGCCAACCATGTCTATAGATTTAGGGTAGTTTGTATACACCTAGTTCAGGAGCCTTTTATCCTTTCAAATGAGAATGAACACATGCATCGTTTTCTTTCA GTCCATAACAAGAGAAGTCAGGCTGTCGCACTTTTTTTTGTACTAACAAGAATAATTATCCTTTCCAACAAGTGTCGCTTCTAGTAATTGAATGCGCTGA CCTTTTGGTTATTCTAGGAATCTAGCGGATCATTACACCACTAGATCAACGTCTTGAGTAATTTGTATGTATCTGACTCTGATATTAAGGGACAAATTGT TTATCTAAATTGTTTGAGTAATTTGTATGCACATAAACAATCTTTAAAATAGATAATACAAATGAATGGTAGATGATG BLAST |
Tissue | flowers |
Gene name | LI_gene_55372; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_269412
Blastp | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 from Arabidopsis with 60.34% of identity |
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Blastx | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 from Arabidopsis with 60.34% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT2G35160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445023.1) |
Pfam | SAD/SRA domain (PF02182.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |