Id Trinity | FTRINITY_DN55891_c1_g2_i13 |
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Name Transcript | Ll_transcript_268756 |
Sequence | AGTAGGAGACATATGAATAAGCAAAAGCTAGAGGAGCTAATTCTGTTAAACGTGCAATTACTGAAGAAGTGAAGCAATCCAGGATTTTGGGCTACATAAC AGCTCTCAAGAAGTTGTGCAATCATCCAAAGGTATTATTTTGTCTTTTTTCTGGAGAATATCTGTTTTTATATATTTTTAAGAAAATTCATTTTTGGTAA ATGATATGATTGGTTAGTGTTCATACATTCTTGATAATAGATCATGAAGCTGTTAACTTAGTCTTAACCTTTGATCATCTATTAAAAACAGCGAGTGAAA CTTGTCCTCTCCTTTAATATTTTGTAAGTTTCAGACATACTTTCATCCTGACAGAAGATAGTGTCTTGTAGCTTATATATGATACCATCCGAAGTGGGAA CCCAGGAACTTCAGGTTTTGAGGACTGCATTCGATTTTTCCCTCCTGAAATGTTATCTGGAAGGTCTGGCTCATGGACTGGAGGGAATGGAGCTTGGGTT GAACTATCTGGGAAAATGCATGTCTTAGGAAGATTACTTGCTCATTTACGTCAGAGGACAAATGACCGCATTGTCCTTGTCTCAAACTACACTCAGACTC TCGATCTTTTTGCTCAATTGTGTCGGGAACGAAGGTACCCTCATTTGAGACTTGATGGCACTACATCAATCAGTAAAAGGCAGAAGTTGGTCAACTGCTT TAATGACCCATATAAGGATGAATTTGTTTTTCTGCTAAGCAGCAAGGCCGGTGGTTGTGGACTCAATTTGATTGGTGGAAATCGACTTGTCTTGTTTGAC CCCGATTGGAATCCAGCAAATGATAAACAAGTAATATGCCATAGGCTTCGTTTTATTAACATCGGAAATTTCCGTACACAAGCTTTCTCTCCTCTCTATA TCATACATTCTTTTGTTATTTTATTTGCAATTTATCCTTGCTCATAAATAGGCTGCAGCAAGAGTGTGGAGGGATGGGCAGAAAAAAAGAGTTTATGTTT ATAGATTTTTGACTGCCGGAACAATTGAAGAAAAGGTTTATAAACATAAGCGCATCTTACATTTTTTCCCGTTTAGTATCAGTGC BLAST |
Tissue | flowers |
Gene name | LI_gene_55397; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_268756
Blastp | Protein CHROMATIN REMODELING 25 from Arabidopsis with 86.72% of identity |
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Blastx | Protein CHROMATIN REMODELING 25 from Arabidopsis with 85.06% of identity |
Eggnog | helicase(COG0553) |
Kegg | Link to kegg annotations (AT3G19210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444509.1) |
Pfam | Helicase conserved C-terminal domain (PF00271.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |