| Id Trinity | FTRINITY_DN55891_c1_g2_i27 |
|---|---|
| Name Transcript | Ll_transcript_268781 |
| Sequence | AAGAAATGAAAAAAAGGCGGGTCTCGGGGGAAACAGAGAGGAGAGTTTGAGGAGAGAATGGAAGACGAAGATGAACAAGTGGTGTCTCTGTCCTCTTCTT CTTCCGATTCAGGCGATGACGAATACTCCGTCGAAGATGAACAAGCGGTGTCTCTGTCTTCTTCTTCTTCCGATGATAAAGAACGCAAATCTCAGAATGT GGATGCTCTGCTCAGCGGAAAGTTGATAGTGAAGAGGCAATCGTTGGTACCGCAAGTTCTATCAGTTCCACTTTGTAGAAAACCCTTCAAACCTCCATGC TCCTCTTCCAATTACAACCAACACCTTAGTCGGAGGCTTTCCCTCCGTAAAAGGTTTGTTCCTTGGAGACAACAACAACCTTCTGTCTTGCTTGAAACCA CTAACATACACTTCAATAATACAGACCTTGTACAAGAACAAGAACAAGAGGATAAACTTTGTTTGCCCCCTGGGATTGATCCTCTAATACTGTGGGACCC TCCTCAAGGTCATGACCACCAACCAATTTCTGTTCACCCTTTGCTTGTTCGTTTCCTTCGTCCTCATCAAAGGGAAGGAGTTCAGTTTATGTTTGATTGT GTCTCTGGCCTACGTAGTTCTGCCAATATCCATGGCTGCATTTTGGCTGATGATATGGGTTTGGGAAAGACATTGCAATCCATCACGTTACTTTATACTC TACTTTCTCAAGGCTTTGATGGCAATCCAATGGTTAGAAAGGCCATCATTGTCACCCCTACCAGCCTTGTCAGTAATTGGGAAGCTGAAATCAATAAGTG GCTTGGATCTAGAATTCATCTTCTTGCTCTTTGTGAAAGCACAAGAGAAGATGTCATCTCTGGGATTCAAAATTTTACAAGTGCCCGCACCACGTTACAG GTGCTGATTGTTTCATATGAGACATTCAGAATGCACTCTTTAATGTTCAGCTCCACTGACTCTTGTGACCTTCTTATATGTGACGAGGCTCACAGACTGA AAAATGATCAGACAATAACCAACCGGGCATTAGCTGCTCTACCATGCAAACGTAGAATTTTGTTGTCAGGAACTCCTTTGCAGAATGACTTAGAAGAATT CTTTGCAATGGTTAACTTCACCAATCCTGGAATATTGGGTGATATTGCACATTTTCGACGGTACTATGAGGCACCAATTATTTGCGGAAGAGAACCTACT GCCACTGCAGAAGAGATGAAGCTAGGTGCTGAACGCTCCACAGAATTAAGTATCAAAGTTAATCAGTTCATATTAAGAAGGACTAATGCATTATTATCGA ATCACTTACCACCAAAGATAATTGAAGTTGTTTGCTGCAAGTTGTCTCCATTACAGTCAGAGCTATATAAACATTTTATACAATCAAAAAACGTTAAACG TGCAATTACTGAAGAAGTGAAGCAATCCAGGATTTTGGGCTACATAACAGCTCTCAAGAAGTTGTGCAATCATCCAAAGCTTATATATGATACCATCCGA AGTGGGAACCCAGGAACTTCAGGTTTTGAGGACTGCATTCGATTTTTCCCTCCTGAAATGTTATCTGGAAGGTGGATAGTTTGGATTATATTTCACTTAT ACATTAAGTCTCTACATTAGTGATGCTACAGGAGTTTTCTGGACAGGTCTGGCTCATGGACTGGAGGGAATGGAGCTTGGGTTGAACTATCTGGGAAAAT GCATGTCTTAGGAAGATTACTTGCTCATTTACGTCAGAGGACAAATGACCGCATTGTCCTTGTCTCAAACTACACTCAGACTCTCGATCTTTTTGCTCAA TTGTGTCGGGAACGAAGGTACCCTCATTTGAGACTTGATGGCACTACATCAATCAGTAAAAGGCAGAAGTTGGTCAACTGCTTTAATGACCCATATAAGG ATGAATTTGTTTTTCTGCTAAGCAGCAAGGCCGGTGGTTGTGGACTCAATTTGATTGGTGGAAATCGACTTGTCTTGTTTGACCCCGATTGGAATCCAGC AAATGATAAACAAGTAATATGCCATAGGCTTCGTTTTATTAACATCGGAAATTTCCGTACACAAGCTTTCTCTCCTCTCTATATCATACATTCTTTTGTT ATTTTATTTGCAATTTATCCTTGCTCATAAATAGGCTGCAGCAAGAGTGTGGAGGGATGGGCAGAAAAAAAGAGTTTATGTTTATAGATTTTTGACTGCC GGAACAATTGAAGAAAAGGTCTATCAGCGTCAGATGTCAAAAGAAGGGCTGCAAAAGGTCATTCAACAGGAGCAAACAGATAGCAGTGTGGCACAGGGTA ACTTACTTTCGAAAGAGGATCTTCGTGATTTATTCACTTTTCATGAGAGTGTCAAGTCAGAGATCCATGAAAAGATGCGATGCACACGGTGTCCAACATA CAATGGGCCTGAAAGCACTGACGAGAAGTATGTGGAATCTCAATCAACAATAATGAATAGTGAATCTGAGGAGGAAACCTGTGATATAGGTGGATTTGCA GGAATTGCTGGCTGCTTAGAGAAGTTAAAAAGATCAGAGAAGCAGGTTGGGAGCCCATTGGAAGAAGATTTGGGTAGCTGGGGACATCATTTTTTCCCAA CTTCTGTCCCAGATGCTATCCTTCAGGCTTCAGCAGGTGATGAGGTGACTTTTATTTTCACAAACCAAGTTAACGGAAAGCTGGTACCCATTGAGTCCAG CATCACTCCGGAGTTGCAACAAAAAGAACCAAATAATGAAATACTCCTCAAGTCAAAGCTAAACGTCAGATATTCTTTGCATAATAAACTACCACTACGG GTACGGGGTGTTGCTACTACTAGTACAACATCTTCCTTTCTTAAATCTTCTTCGATTAAGGAAGCACTACATTCTGTCAGAATTACAAAAAATATCTCAG CAACTCCTGTAATTAATTCATTACCACTAAAAAGATCATGTCCTACTAATATAAGTGATGATGATTATCTCGATTAATACTTGGTTATTGCATTTCTTTT GGTTTTCAGCTGCCCAGGAGAAGGGTGGCTGTAACCATTAGCTTAGAACTGGTGTGAAATTATAGAATATACATGTTCTTTAAAATTACATTAAAAAAAC CAGTTTCTTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55397; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_268781
| Blastp | Protein CHROMATIN REMODELING 25 from Arabidopsis with 66.86% of identity |
|---|---|
| Blastx | DNA repair and recombination protein RAD54 from Oryza sativa with 70.45% of identity |
| Eggnog | helicase(COG0553) |
| Kegg | Link to kegg annotations (AT3G19210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444509.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |