Ll_transcript_248737

• Id Trinity: FTRINITY_DN55903_c0_g2_i1
• Name Transcript: Ll_transcript_248737
• Sequence: ATTGAACACTAAACTGTGAACCCTTCTCTCTCTTCATTCTCATCTTTCAAAACCTCGCTCATGGCCACCGTCCTTCCAATGCACAACGCTAACCACCCAA CCGATGAGCCACAATCCGAATCAGCCGCGGAGAAAAGGTGGCCGGGTTGGCCCGGCCACTGCGTTTTCCGGCTGATTGTGCCGGTGGTGAAGGTAGGAAG CATAATAGGGCGCAAAGGAGAACTCGTGAAGAAAACATGTGAAGAGACTCGAGCTCGTATTCGCGTTCTGGATGGCGCTGCTGCTACCTCTGATCGAATC GTAGTCATATCAGGGAAGGAAGAACCTGAGGCACATCTTTCTCCTGCAATGGTTGCTGTGATAAGGATTTTTAAACGTATCTCGGGATTATCTGAAACTG ATGGTGAAAATCTGTCAGGAGCTGCTGGTATTGCATTTTGTTCTGTTCGTTTATTGGTGGCATCAACACAGGCTATAAATTTGATTGGAAAGCAAGGCTC ATTAATTAAATCCATACAGGAAAAAAGTGGTGCTTCTGCTAGAGTATTGTCAGGAGACGAGGTACCATTTTATGCTGCTGAGGATGAGAGGATCGTGGAA CTACAGGGAGAAGCCTCAAAGGTCCTTATGGCTCTGGAAGCTGTCGTTGGGCACCTGAGGAAGTTTTTGGTTGATCCAAGTGTTCTTCCTCTATTCGAGA AAAAAACTTACAATGTGGCAATCTCCCAAGACCGCCAGGCAGATACCATGGTTGACAAGCAGCCATCACTGCATAGTGCATCACAACCTAGAAATGTTGC TGATATTCCTCTTCCAACAAAAAGGGATTATCTCTTTGCTGACCGTGAAAATCAATTGGATTCATTATTCCCTTCCTCCACAATGTCACTATATGGGCAA GATTCCTCGCTTTCTGGTCTTCGTTCTTCAGCTCTTAGCCGTGCTGGTCCTTCTATTGTTACTACGGTAATACAAACAATGCAAATACCACTGTCCTATG CAGAGGACATCATTGGTATACAAGGAACTAATATTGATTACATTCGCCGTACTAGTGGAGCCATATTGACTGTGCAGGAAAGCAGGGTACCTGATGAAAT CATTGTGGAAATAAAAGGCAACTCATCTCAGGTTCAAACGGCACAGCAATTGATTGAGGAAACTATAAGCAATCACAGAGAACCGGTTGCTAGTGGTTAC AGCAGGTTAGATGCAGGTCTGAGGTCTTCTTACTCTCAATTAGGCAGTTCATCGTACTCTTCATCATCAGTGGCCATGCAACCCTACAATGGGTATGGAT CTTCTGGTCTAGGAGGATACAGTAATTTCCGACTTTAAATTACTGTGGTATTTCTAGGAATATATTTTGAGCTAGTTTGTTCCAATCAAGTCTGGTCGGA GAGAATTAATGCTGGAATGTACTGTGAAGCTACTAAAAAACATGTTTTTTCATTTATATGATATCATGTAATTAGGTGATTTTCAATGTGGCAAAGAGTT GAGTAATGCCATAGAAAATGTAATGAAATGTTAGTCATATTCATGATTTAGTTTTGTTGTGTATATGTGAATTGATTTAGAAGCATGATGGTGGTCACAT CCATAGGGGTATGAAACTATATTTTGAATGTTATGTTAGGCTTGCACTTGCAACTATATTCATACATTGTTAGTATCATGGCCTAAACTTTGGCCCCTCA TTTGTTATTGAAATAGAGATAGGCCACACCGAAACTTCTATGAACTATGATGTTAATTTGTCAATCAAATATAAAGAATAATAATTTGAC
• Tissue: flowers
• Gene name: LI_gene_55513;
• Additional information: details;

Expression of Ll_transcript_248737

FPKM

• FPAB: 5.3
• FPNAB: 7.8
• LF1: 7.3
• LF2: 5.9
• LF3: 7.3
• LF4: 7.8
• UF1: 7.2
• UF2: 7.5
• UF3: 7
• UF4: 7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_248737

• Blastp: RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 54.5% of identity
• Blastx: RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 60.8% of identity
• Eggnog: mRNA transport(ENOG410XNN8)
• Kegg: Link to kegg annotations (AT4G26000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442648.1)
• Pfam: KH domain (PF00013.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;