| Id Trinity | FTRINITY_DN55907_c3_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_250780 |
| Sequence | ACACCTTAATTGCGGCGTGATGTGGTTGCGGCGGTCACCGCAACCGCAATATTGCGGCCGCATCAGGTGATGCGGTCCACATTTTAAAACATTGTTAAGC CCTTCATTCTTATGATTAGACCACCTTATGACTCATAACATGTTAATAATTAATGATGATGATAGTGAACTTTGGAGCTGCATCCGTGTCCCAAAATTTG TCTCACTTCATGCATCCATCCATTCACTCTCACTGGCCTGAAAAGTAAAACCTAAATTTAATATATATTTTATATTTTCTGACTAATGAGAATGAAAATG TATAGAGAGTGGTACACATCTTCGAACACAAGATGTGCTCCCATAAACTTTGTGAATAAAAATGTGAAAATTGATGTGGGCATGCATGCAGGTGACAAAG AGGGTGGAAACAGGGGAAGATACAGGGGAGGATACATGGAAAAACTGGAATTGGAGATCTGATGGAGACCTTTTACTGAATGGAGCATATTTTACTGCAT CAGGAGCAGGATCTGCAGCAAGTTATGCTAGAGCCTCAAGTTTGTCAGCACAATCTTCTTCAGTGGTTGGTACCCTTACCTCTGCTGCTGGTGTTCTTAA CTGCCGCAGAGACTTTGTTGGGAAGCATCAAGCCAAAACCAATGGTTCCTTTTACACATCTAAGAATCATCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55565; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_250780
| Blastp | Probable pectate lyase 15 from Arabidopsis with 66.22% of identity |
|---|---|
| Blastx | Probable pectate lyase 18 from Arabidopsis with 54.32% of identity |
| Eggnog | pectate lyase activity(COG3866) |
| Kegg | Link to kegg annotations (AT4G13710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450202.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |