Ll_transcript_250781

• Id Trinity: FTRINITY_DN55907_c3_g4_i2
• Name Transcript: Ll_transcript_250781
• Sequence: ACAATATGTAACAAATGTTATAGTCCATGGGATTAATATACATGATTGTAAGCAAGGTGGTAATGCTATGGTGAGAGACTCCCCAAGGCACTATGGGTGG AGAACCATATCAGATGGTGATGGTGTTTCAATCTTTGGAGGGAGTCATATATGGGTGGATCATTGTTCTTTGTCTAATTGCAATGATGGGTTAATTGATG CTATTCATGGGTCCACAGCTATTACTATATCCAACAATTACATGACACACCATGACAAGGTCATGTTATTGGGTCATAGTGATTCATATACTCAAGACAA GAACATGCAAGTCACAATAGCTTTTAATCACTTTGGAGAAGGGCTTGTTCAAAGAATGCCTAGGTAAAGTAAAGTAAATTATTGTTTTTCCAATTTCTAA CTCATAACTCAGTCTTTGAAATGGAGTAATAGGGATACTACAAGTTTTATAATTGTTATGAGAAATTGTACATACATACCAAGAAAAGAAAGACAATAAG GAGTAAAGGGAAAGTGAAAAGGATGTATAGAAAATTAGAAATGAAAGCATGTGCATGGGGATGAGTGTGTGTCACTTTGTCAATACTCTTAATTGCTATG TGGGGCCATTATTGCTAATATTTTGAAAAACATTATATTTGTGATTATTGCAGGTGTAGGCATGGATATTTCCATGTGGTAAACAATGACTATACCCACT GGGAAATGTATGCCATAGGGGGAAGTGCTAATCCAACCATCAATAGCCAAGGCAATAGATTTGTTGCACCCAATGACAGATTCAGCAAAGAGGTATAAAA TATAGAGAAAAATGATTTATATACGGTACTATAAGAGTTTTATATACTGTCAATCCATTATTCATTTTTAATTTCACTTTAACAAAAAATACAAATGAAT GATAAATGATATTTTGTGTATAAAGCTTTATACCGACATGCATATATGTTACACTATAAACTATATTCATCAAACAAAAATAAAAATCTCTTTTATTAAT TTGCTTAAATGTCTTAAATCACTAGTTAATAGTTATACTAAGATATTTAATTGTTATGTGAATTAGGTAACAAAGCATGAGGATGCACCAGAGAATGAAT GGAAGGGGTGGAATTGGAGGTCAGAAGGAGATTTGCTAGTAAATGGTGCATTTTTTACAGCATCAGGTGCTGGAGCTTCATCTAGTTATGCTAGAGCTTC AAGCTTAAGTGCAAGGCCATCTTCTCTTGTGGGGTCCATAACCACTGGTGCTGGTGCACTCAGCTGTAGGAAAGGTTCTACTTGCTGACCGGTCCATTAG CACCAAATAGGAATTAAAACAAGAATGAAACTAAAACAATTATTAGAAAACAAGGGAAGGAATTGAGAAAAAAATGTCCCTATTAATAGACTATGGTAAT TTAATATTCACTGTAATCACCCTATATATATACTAGGATTTCCTTCTTCCATTATTTTCATTTTCTAGTAGTTGTCTTTCTTTTCTTTAATTTGGTTTTA GTTCTCTACGACTTGCATGATTATTAGTTATTACAACCTCAGCCTATGAAACTCTTGGAACCATATCTGTTGGAGAATATCCATGGTCAAAGAGAAAAAA AGGTGCAGAAGAGTTGATATGTCGTATGTAATATGTGTATGTAATCCTATAATATACAATTACATGTTGGAAATTTCTACGTTGAGCCCTGTACCTATTT TTATCTGTTACTGTGACCGACACATGCGCTGACACACAAATGCACAGTGTTGACTAAGGACCAAGGAAAAAGTGAAGGCAGAGTTTCAATAAATGGAAAT AAAATGAAATCTTCTTACACCACCAATCAAGCAAAGATTGTAAGATGTGTTTGGAGCAACGTGATAGGTTCAACGACTAACTACAACGTAAGAAATAGAA ACTTCACAGAGTCATATAAATGGGTCACGCCTCACTTTTTAAGCTTTATTGTAACTCGTGATTCGTACAGATTGTGTTTTCAGACCATAGTACACCATAT GATCTGTTCTACACAGTTATATCTCTAACTATGTATCAAATTATTCATATTGCATACAAAACAAATAAAATGATAAATATTTAATTTTTCC
• Tissue: flowers
• Gene name: LI_gene_55565;
• Additional information: details;

Expression of Ll_transcript_250781

FPKM

• FPAB: 0.4
• FPNAB: 0.4
• LF1: 1.6
• LF2: 4.3
• LF3: 0.4
• LF4: 0.2
• UF1: 1.5
• UF2: 4.5
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_250781

• Blastp: Probable pectate lyase 5 from Arabidopsis with 87.6% of identity
• Blastx: Probable pectate lyase 5 from Arabidopsis with 87.6% of identity
• Eggnog: pectate lyase activity(COG3866)
• Kegg: Link to kegg annotations (AT1G67750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (NP_001242543.1)
• Pfam: Pectate lyase (PF00544.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;