| Id Trinity | FTRINITY_DN55907_c3_g4_i7 |
|---|---|
| Name Transcript | Ll_transcript_250798 |
| Sequence | ACAATATGTAACAAATGTTATAGTCCATGGGATTAATATACATGATTGTAAGCAAGGTGGTAATGCTATGGTGAGAGACTCCCCAAGGCACTATGGGTGG AGAACCATATCAGATGGTGATGGTGTTTCAATCTTTGGAGGGAGTCATATATGGGTGGATCATTGTTCTTTGTCTAATTGCAATGATGGGTTAATTGATG CTATTCATGGGTCCACAGCTATTACTATATCCAACAATTACATGACACACCATGACAAGGTCATGTTATTGGGTCATAGTGATTCATATACTCAAGACAA GAACATGCAAGTCACAATAGCTTTTAATCACTTTGGAGAAGGGCTTGTTCAAAGAATGCCTAGGTGTAGGCATGGATATTTCCATGTGGTAAACAATGAC TATACCCACTGGGAAATGTATGCCATAGGGGGAAGTGCTAATCCAACCATCAATAGCCAAGGCAATAGATTTGTTGCACCCAATGACAGATTCAGCAAAG AGGTAACAAAGCATGAGGATGCACCAGAGAATGAATGGAAGGGGTGGAATTGGAGGTCAGAAGGAGATTTGCTAGTAAATGGTGCATTTTTTACAGCATC AGGTGCTGGAGCTTCATCTAGTTATGCTAGAGCTTCAAGCTTAAGTGCAAGGCCATCTTCTCTTGTGGGGTCCATAACCACTGGTGCTGGTGCACTCAGC TGTAGGAAAGGTTCTACTTGCTGACCGGTCCATTAGCACCAAATAGGAATTAAAACAAGAATGAAACTAAAACAATTATTAGAAAACAAGGGAAGGAATT GAGAAAAAAATGTCCCTATTAATAGACTATGGTAATTTAATATTCACTGTAATCACCCTATATATATACTAGGATTTCCTTCTTCCATTATTTTCATTTT CTAGTAGTTGTCTTTCTTTTCTTTAATTTGGTTTTAGTTCTCTACGACTTGCATGATTATTAGTTATTACAACCTCAGCCTATGAAACTCTTGGAACCAT ATCTGTTGGAGAATATCCATGGTCAAAGAGAAAAAAAGGTGCAGAAGAGTTGATATGTCGTATGTAATATGTGTATGTAATCCTATAATATACAATTACA TGTTGGAAATTTCTACGTTGAGCCCTGTACCTATTTTTATCTGTTACTGTGACCGACACATGCGCTGACACACAAATGCACAGTGTTGACTAAGGACCAA GGAAAAAGTGAAGGCAGAGTTTCAATAAATGGAAATAAAATGAAATCTTCTTACACCACCAATCAAGCAAAGATTGTAAGATGTGTTTGGAGCAACGTGA TAGGTTCAACGACTAACTACAACGTAAGAAATAGAAACTTCACAGAGTCATATAAATGGGTCACGCCTCACTTTTTAAGCTTTATTGTAACTCGTGATTC GTACAGATTGTGTTTTCAGACCATAGTACACCATATGATCTGTTCTACACAGTTATATCTCTAACTATGTATCAAATTATTCATATTGCATACAAAACAA ATAAAATGATAAATATTTAATTTTTCCâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_55565; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_250798
| Blastp | Probable pectate lyase 22 from Arabidopsis with 84.3% of identity |
|---|---|
| Blastx | Probable pectate lyase 22 from Arabidopsis with 79.34% of identity |
| Eggnog | pectate lyase activity(COG3866) |
| Kegg | Link to kegg annotations (AT5G63180) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457441.1) |
| Pfam | Pectate lyase (PF00544.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |