Ll_transcript_250670

• Id Trinity: FTRINITY_DN55910_c0_g1_i11
• Name Transcript: Ll_transcript_250670
• Sequence: AGAGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACGATGGCGGTGGCGCGTGACATAGACGACTTGCCAAA GAACGCGGCGAACTACACAGCGTTGACACCGTTGTGGTTTGTAGAAAGAGCAGCTCAGGTGCACCCGACGAGAAAATCAATCATCCATGGATCCCGTCAC TACACGTGGCGCCAGACCTATCAGCGTTGCCGTCGATTGGCCTCTGCACTTTCAAATCGTTCCATCGGTCTCGGAAACACTGTAGCTGTTATTGCACCCA ACATTCCAGCTCTGTATGAAGCTCATTTTGGAATTCCAATGGCAGGAGCTGTACTGAACACTGTTAATACAAGGCTAAATGCATCCACAGTAGCTTTCCT TCTCGGTCATTCCTCAGCGGAAGTGGTAATTGTGGACCAGGACTTCTTTTCCTTGGCTGAAGAAGCTTTGAAAATCTGGTCTGAAAAAAACAAAACCTTC AGGCCTCCAATTTTAATTGTCATTGGTGATGAAAACTGTGATCCTAAGACACTTCAATATGCTTTGGACAAAGGAGCCATTGAATATGAAGAATTTCTTC AAAGTGGTGACCCTGAATATGCATGGAAACCCCCAGAGGACGAGTGGCAGAGCATTGCTTTGGGTTATACATCCGGTACCACTGCTAGTCCTAAGGGTGT GGTGTTGCACCACCGAGGAGCATATCTAATGTCTCTAAGTGGGGCTCTTATTTGGGGAATGAGTGAAGGAGCGGTATACCTTTGGACACTTCCTATGTTT CATTGCAATGGTTGGTGCTACACTTGGACAGTTGCAGCTCTCTGTGGCACGAATATATGTCTTCGTCAGGTAACAGCTAGGGCAGTATATGAAGCCATTG CCAAATACAAAGTGACTCACTTTTCTGCAGCACCAGTGGTGCTTAACACAATATGTAATGCCCCAGCTAATGAAACCATCCTTCCTCTACCCCATATCGT AAATGTGACCACAGCTGGTGCTGCTCCTCCTCCTTCTGTTCTTTCTGCCATGTCTCAACGAGGATTTCGTGTCACACACACTTATGGCCTCTCTGAAACC TTTGGCCCCTCCACAGTTTGTGCCTGGAAACCAGAGTGGGAATCACTTCCCATTGAAACCCAAGCCCGACTCCATGCAAGGCAAGGGGTTCGGTACATTG GCTTAGAAGGCCTAGAAGTCTTGAACACTAAAACCCTGAAACCTGTCCCTGCCGATGGTAAAACAGTTGGTGAGATTGTGATGAGGGGTAATGTTGTGAT GAAAGGATACTTAAAGAACCCCAAAGCCAATGAAGAATCCTTTGCAAATGGATGGTTTCATACCGGTGATCTTGCTGTAAAGCATCCAGATGGGTATATG GAAATTAAGGACAGATCAAAGGATATAATCATATCTGGTGCTGAAAATATAAGCAGTGTGGAGATAGAGAATACCCTTTACTCTCATCCAGCAATACTTG AGGCGTCAGTGGTAGCAAGACCAGATGAGAAATGGGGTGAATCTCCTTGTGCTTTTGTGACATTAAAGCAAGGAGTGGATACAAGTAATGAGCAGCTTCT AATTGATGATATATTCAAGTTCTGTAGAGCCAAAATGCCTGCTTATTGGGTCCCAAAATCAGTCATCTTTGGACCCTTACCAAAGACAGCTACTGGGAAG ATTCAGAAGAATTTGTTGAGAGCGAGGACAAAAGAGTTGGGGCCTGTTAAGATAAGCAAGTTGTAATCACAATAAGGAAAAATGCTGCTAGATGTTATTG TGTGATTAGGATGGTTTGTTCACAGCTATGCTTTTATGTTTGGCAATAAAAGAGTAGTGCTGCTATACTACTTTTTTAATTTAAGGATATGTTCGGTTGG GTTGAAAAGTGAAGAAAAGGAGAGGAAAGAAAATGGGTGGATTTCTATTTTTTTCCTTGTTTGGTTTACAAAGTAAAGTAGGAAGGAAAGAAAAGTATTG TGTGGCCCCCATCAAAAACTTTTCCACCCGAATGTGGAAAGAAAATAATGAGAAACCAACCATCAATGTAGAATTACAATTTTATCCATAAAATTATAGA TGATGTACTATAATATGAGATAAACAAATACAATAAGTTGATTGACCTTAAAATTTATATAAATAATATTTTAATTAATTAATTTTAATATAAATATATT TTATACATAATTATTTATAGAAATATTTAATTCTAAAAGAAAAGTTAATATTTGTATGCAATGTTATGAAAGCCGAGC
• Tissue: flowers
• Gene name: LI_gene_55592;
• Additional information: details;

Expression of Ll_transcript_250670

FPKM

• FPAB: 31.2
• FPNAB: 21.2
• LF1: 7.7
• LF2: 24.9
• LF3: 24.2
• LF4: 32.5
• UF1: 10.3
• UF2: 9.9
• UF3: 34.6
• UF4: 47.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_250670

• Blastp: Acetate/butyrate--CoA ligase AAE7, peroxisomal from Arabidopsis with 74.42% of identity
• Blastx: Acetate/butyrate--CoA ligase AAE7, peroxisomal from Arabidopsis with 74.42% of identity
• Eggnog: Amp-dependent synthetase and ligase(COG0318)
• Kegg: Link to kegg annotations (AT3G16910)
• CantataDB: Link to cantataDB annotations (CNT0001009)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464789.1)
• Pfam: AMP-binding enzyme (PF00501.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;