| Id Trinity | FTRINITY_DN55910_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_250687 |
| Sequence | GGCCGTTGAAGCTCAAAAATTCACACATCTCACAAAAGAGAGAGAAAAACAAAAACTTCATATCATATAATAACGCAAAACACAACACAACAACACAAAC GAGGAAACAAAAACAACAACATCAACAAACTCAACCTCAAATTTAAATCTTGTTTCAACTCACTCCACTAGTGTATAGAGAGAATATCAAAGTGAAGAAA AATAAGAAGAAGAAGAAGAAGATAAGAATATGACAGGAACTGTGATAGTAAGCATGAATGGTGCATGTGGAAAAGGAAGAAGAGTTACTAAAACAACTGA ATATGAAGAAGTTGAAGAAGAACAGAATCAGGTTTCTCCGGTGGCGGTTTTGTTAGCGGCGTTGAGAAAATCTATGGTGGCGTGTAGTGTGGAAAGTCCT AACGATGTAATCTCCACCGTTCATCATCATCATAAAATGGAGATTGGATGGCCCACAAATGTTAAACATGTTAGTCATGTTACTTTTGATCGTTTCAATG GCTTTTTGGGTCTTCCCATTGAGCTTGAGTTGGATATACCTTCTCCAGTTCCTAGTGCTAGTGTAAGTGTGTTTGGGGTCTCAGCAGAATCAATGCAGTG TTCTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTCTTACTAATGCAAGAGAGATTATACTCACAGGAAGGACTAAAGGCTGAAGGTATATTTCGC ATAAACCCGGAAAACGGCCAAGAGGAGCATCTGAGAGACCAGTTGAATAAGGGCATTGTGCCAGATAACATTGATGTACATTGCTTGGCAGGCCTGATTA AAGCGTGGTTTCGAGAGCTTCCTTCGGGAGTGCTCGATGGACTTTCGCCTGAGCAAGTTCTTCACTGCAATACTGAAGACGAATCTGTTCAACTTGTGAA GATGCTAAAGCCAACTGAATCTGCCTTGCTCAATTGGGCCATTGATCTCATGACTGATGTTGTAGTAGAAGAGGAGTATAACAAAATGGATGCAAGAAAT ATTGCAATGGTTTTCGCCCCGAATATGACTCAGATGTCTGATCCACTAACTGCGCTGATGCATGCGGTCCAAGTGATGAATTTACTGAAGACTCTGATAC TGAAGACACTACGAGAACGTGAAGAAACAACGACATCGGGATATTCATCTATGTCATGCCATTCATCATATCACCAATCCGAAGATGAGTATGACAGTCA GCAAGAAATGGATACTAGTGGCGAATTGATAAGGACCAAGTCGGATTATGACGATGATCATGTTCACTACAACCATACTAGTGAAGAGGAAGGTGAGGCT GCATCTATAAGTGAGATTGAGGAATGCTTCTTGAAGACTTTGGATGAGAACACAACAAAATTCTCAGAAGAACCTGCAGGGTGTTTACAAGAGGAGCTTG CAGCCAGAACTAGACATTGCTCAAGCCATAACATGGAATCTGATATATCATTCACTGAAAATCCGTGCTCGAGTTCGTCTTGCCGAGATGAATCTAGAGC AACTCCAGTCGATATGTCGTCAAATGTTGGTACAAGTAGTTAGTTGATGAAGTGGAGAAAATCGATAAATTTACGCATTATGTTTCCTTAGTTCCACAGC TTGCATCTAGTACAGGCATACATTCTGTTTCATTGATTCCACTGTTTGCATTGCATCTAGTTAAAAACTAAGTTTCTCTAAGAATGCTTAAGTATGTTGT TTTATAGTTTTTGTTTTACAAGCAAGGGTTGCTTGTGTAAATTAATACATGAAGGTAGAAGTGTTTGCTTCAGGTTATGTTCAGTTTAGGGCTGAATTTT GACCTGGTTCTGTATGTTACAGTAGTGGACAAATTATAACTGTGACAAATGGATATGGCTATCTACTATTAAGGAGTAATAGCTATCTATATTTTTAGAT TTCACTTAGGTGGAAGATTTTTATGTACTATGTATTGCTATGTATGCTATGTAATGTGTGTGATCAATATTTGATTTGAAGTTTGGTTGAATGAAAACAT TTAAAATACAATTCATGAAGGTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55600; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_250687
| Blastp | Rho GTPase-activating protein 2 from Arabidopsis with 66.94% of identity |
|---|---|
| Blastx | Rho GTPase-activating protein 2 from Arabidopsis with 73.72% of identity |
| Eggnog | rho GTPase activating protein(ENOG410XRR2) |
| Kegg | Link to kegg annotations (AT4G03100) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003521525.1) |
| Pfam | P21-Rho-binding domain (PF00786.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |