Id Trinity | FTRINITY_DN55915_c0_g1_i6 |
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Name Transcript | Ll_transcript_249561 |
Sequence | GAAACGCTGCGCACAAAGTTAGGGTTTTCGGAGAGAGAGAGAGACGGAGAGAGGGCCAATTTCTACGAAGAACAAAAAATGGCGACTGCACCCGCACTCG AACAAGTCCAGTGCTTCGGCCGCAAGAAAACCGCCGTCGCCGTCACTTACTGCAAGCGCGGTCGCGGCCTGATCAAGATCAACGGAAGCCCAATCGAGTT GGTCGAACCGGAAATCCTCCGGTTCAAGGCATTCGAACCGATCCTCTTGTTGGGAAAATCTCGGTTCGCTGGCGTTGACATGAGAATCCGCGTGAAGGGT GGAGGACACACTTCCCAGATCTACGCCATAAGGCAAAGCATTGCAAAGGCACTCGTCGCGTTTTACCAGAAGTATGTTGATGAACAGAGCAAGAAGGAGA TCAAGGACATTCTTGTCAGGTATGATCGTACTTTGCTTGTAGCTGATCCAAGGCGCTGTGAGCCTAAGAAGTTCGGTGGTCGTGGTGCTCGTGCTAGGTT CCAGAAGTCTTACCGTTGAAGAAGGAAAAGAGAATGTGTTTTTTGGTCTTTTGGTTTTCGGTTCATGTTTTATGCTGTGGAAAACCTTTGTTATTTTCGG CATTTTTGCTTTAATTATTATCGAATGCTTTGTTATTTTAATTGAACCTGTTTTATTTAGATATGTTTGCAATTTGCAGGCATCATATAAGGTTATCTTA TTTTCACTTTAAAATCTCAGTATCTTAGGTTTGTGCTTATGCTTGCTCCTTAATGTGTATTCCATATAGTATCCTGAGGGTATTGGAATCTGTTAGTGCA CTCGTTTGTTAATTTCATGTTTATTTGCAATTACGTTAGGTTTAAATACAATTGGAAATAGGGTAGCTGTACATTAGGGATTCAGTTCAACTCTATCAAC CTATGATTTTGGGATTAGAGTTCTTTTTTACTTCTACTCTCATGGTATTTAGAGATGCAAACATTTTATAGGGCTATGAATTATAGTGATCTCAAGTTAA AGTTCTTAGGTGTTTAATATCTGTTTGTTGTTATCACAGAGATTATGTGCTGTGTTTTCTGTCTTTTCTACATTGATATAGCTTAGGTGGACAAATCAAG TTGGTTTGTCTAAGACATTTATGTCCATAGGTAAGTTTTACCACGCCGTTGTCATGTGCATACAATTTATCAGGATCCATATTGTTAGTGTTTTTTAGTC ATCAAGTTAATAACACTGTTGGAGTTAGGAGAGGCTATTTTTTGCTTCAAGTAATGGTTGTTTTGTTGTATTATCTTTGTTAAACTGTG BLAST |
Tissue | flowers |
Gene name | LI_gene_55636; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_249561
Blastp | 40S ribosomal protein S16-1 from Arabidopsis with 88.36% of identity |
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Blastx | 40S ribosomal protein S16-1 from Arabidopsis with 88.36% of identity |
Eggnog | 30S ribosomal protein S9(COG0103) |
Kegg | Link to kegg annotations (AT2G09990) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422309.1) |
Pfam | Ribosomal protein S9/S16 (PF00380.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |