Id Trinity | FTRINITY_DN55918_c4_g1_i6 |
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Name Transcript | Ll_transcript_248728 |
Sequence | CCAAATTGTTGTTCTCAAGCATGGAGTGTGGAGGGTGAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACAAGCGCAGTTTAAC CGGGAACCACTTGCTGCCAAATTCAGACTCCCTGAACCAATGAACATGCCTTACATGACTGCTAATCCCACTATTCTTTCTCACAGTCTTCAGCCAAATG ATTCCTTTCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGAAAAAGCAGTGGATATTGTCAACAGCAATCCACATGCGGGTAGTGCCAA GAGACTTATCAAAGCTGCCCTCCACGAAGCAGCTAGAAAACGAGAAATGCGATATTCAGACCTTCGTAAGATTGACAAGAAGGTTCGGCGCCATTTCCAT GATGATATATCTGTTATAGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCACAGTGCTAAGTTCGCCACTCTCAATTCGAAGCGCTCTTGATCACT GACCGGTATGATTGTAAACGTGCTCCGTCTTGTGTACAACTTTTTGGCACTGGAATAATTGTCATTGGCTAAACTTGCCTAGAATATGCCGCTGGCAATG TTAAGGTACAGTTTGGTCTCTGGTATTGAGATCATTGATGAAGCTCGAGATGAAGTTAAACATGTTATTAGAAATTATATCTATATAGACTCCCTTTTTT AACTTTTAAGTCTTATTGCTGGATTTTTCTTTATTTTTTATTTTGGCGATTCAATTACATTCAAGCATCAAGCAGCGTGTTGTTTATTGAATTTTTTTTA CTCATCTGAGTTGAATTTAAATTCAAAAATATTGGACATCTACTTATGAGACTTTCATGTGTTGTCCATCTTTATTTTTTTTCTTCTTTTAAGA BLAST |
Tissue | flowers |
Gene name | LI_gene_55669; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_248728
Blastp | Probable protein phosphatase 2C 42 from Arabidopsis with 78.11% of identity |
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Blastx | Probable protein phosphatase 2C 42 from Arabidopsis with 78.11% of identity |
Eggnog | Phosphatase(COG0631) |
Kegg | Link to kegg annotations (AT3G17090) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419589.1) |
Pfam | Protein phosphatase 2C (PF00481.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |