Id Trinity | FTRINITY_DN55923_c3_g2_i9 |
---|---|
Name Transcript | Ll_transcript_249872 |
Sequence | GTTTGGTCGTACCGATTCGCAGTTCTCTAGCGAAGTGGTTCTCCCCCATTTCTTCCTTACCTCCATGTAAGAAACGAACCAAAACTTTCACCATGAATTT CAATCCAAGAAAGAAAAGAGAAGGAATGAGGATGACAAAATGACAATAAGAATGATACTGAAAAGCTATTGAAAAATAAAAGTTTTAATCTTACTCACCA AGAAGAGGGAGAGGGAGAAAATGGAAAGATAAACCCAGAAAATTGAAAAGTCACGATCAATGGGAAAGAGAAGGCACAGTAGGCAATGGGAAAGAGAAAG TTAGCATTTGAGAAATGAAAAGGCACGTGCAATGAAAGAGAAAATATCTGTTACTTCAAATTATTTTGAGAATAAAATATGATATGAAAGGGTGTCTTAA AAAATGGGACTTGTTTAATAGTTTAATGATTTCAATTTCAATAAAACTATGCATTAAAAAATGGGAATTATTTAATGTTTGTAGTGTTTGAAATCTTAGT CATTACTTTATGTGGGGAAATAAAATTATGCCTTAAAAATATAGATTATTTATCATTCTGATTTTGGTATTATTAACATTAATGAACTATTTAAAATTAT ATTAATAATTGTATTAGAATAATTGTAATATGTACATTATTAGTGTAAATATTTATATATATTTAGTAATTATTAAATAATTGTAATATATACTTAGCGT ACCGAATATTTGAGGTAGTAACATACCGTGTATTACGTATCCGTACCCGTACCGCAAAGAACTGCGTTTCAGGTGACTATGGGGTAGACCACTAAAGTTT GAAAGTTTAGAGAATCAATTGATTTCCCGTCTGAAAGCAAAAATTTTACTAGAAGAAGAATTGTAGTTCAATTTGTTCCGACAATATTAGAGGGTGAGCG TAGCTTAACATTAAGTTGTTGCTTGGTGGTAATGGGTCTGTACTTTTCAAACACCACTAAATGGGCTTCTCTTGCACCGAGCGGCCCCTGTTTTGTTCAC TGACAATGTTATAGGAAACATTATAGTATTATTCTTTCATTTCCATATTTTGATTTTCGTATCCATCGTTTTGTCTCAGATAATTTCTAATGAAGAATAT AAGAGTGCCTATCATCGGGTTTTAGCCAATTCTTCTGGTGAACCACGAGTTTCGGTTGCAGTTTTCCTGAACCCAAGTAACAGGGAGAAGTTATTTGGAC CTTTGCCAGAACTAACATCAGCAGAGAAACCAGCTCTTTATAGGAATTTCACATTCAATGAATTCATGACCAGGTTCTTCAAGAAAGAGTTGGATGGTAA ATCATTGACCAATTTCTTCAGGATTTGATTAATATCTGTTTCATGTTAGTATTACTGTAAAAATATATTTGTAATACTGCATCTGCTGCTATTTGTGTGA ATAAAACCAGTTGTTCTGCAAGGAAAATCTGTTCGGATTTTTCTCTGTTTGGCCCAAAATTTTGGGTAGCAACGGGGTTTTCTGGCTCGATCATTATGCT CCACGGCCTTTAAGGAAGATTTTCTTACATAAATCCAAGGCCAGTTGTAACATTTTGTATCTTTAGTGTGGAAAAAAAGTTTCAGTTGCGCATTAAACTT TGAAATGGTCAAAAACAAATTTTGAGAGCCAAATAAAATTGAGTTGAAGGAAAAATGTTTGTGAACCTGATATACATTTTCCTTTTAGGTTTATTTATTT TTATTTATTGGAGAAGAGTTCTTGATCTCGTACACCAGTGTGAATCTTTTGATTACTAGTGCATCTTGCTATCAAATGCATAGGTCTTGAATCACATCAT CCTGGATAAGCATATCAGGATAAATTGAAGAAGCATATTTCCTCATGCTCCTGTCGTAAGAACTAACCAAAATATTCTTTGGGTGTGGTTCACACGCTCC CTTATTC BLAST |
Tissue | flowers |
Gene name | LI_gene_55715; |
Additional information | - |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_249872
Blastp | - |
---|---|
Blastx | 1-aminocyclopropane-1-carboxylate oxidase homolog 11 from Arabidopsis with 48.24% of identity |
Eggnog | 2OGFe(II) oxygenase(COG3491) |
Kegg | Link to kegg annotations (AT5G59530) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434975.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |