Id Trinity | FTRINITY_DN55931_c0_g1_i6 |
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Name Transcript | Ll_transcript_250424 |
Sequence | CAACATCGTAAAATTTTCTATTAAGCTCGAGTGACACATTTCTATCATATATGATATACCTGAAACATTTCATTATTTCGTCATCCCTGATTGAATCCTA TGATTTACATATTCCTCAATTTTCTCATTGTATGGTGACCAAAGATACTTAAATATAGTAAGTTGTGGTATGATATGATCATCAATTTACCTCTATAGTA GGATTTATTTGTCTTTTGCTAAACTCACTCTGTATACCCCGTCTTACTTCAAATTATACAAAATCTATATGCTTCTAAATCTTGTCTCCACATTTCTAGC TTATCAATTAATTTTTCTCCCGAGTCTCTGATTAGTACAATATCATATGCAAAAAACATGCATTTTATCACTGGTTCTTGGACATGCTCATTAAGCACAT CCAAGATCAATGTACACATGTAGGGGCTCAATGTTGAGTTGTTGATCAATCGAGAAATCTTATGAAACTTCATCTTGTGTTCTCACACTGCACTTGACTC GTGATACATATCCTTGATTGCTTGAATGTAGGCAATTTGAGCTCCTTTCTTCTATAGAGTTTTCCATAATACATTTGTAGGCACATCATCGTATGTCTTC TCCAAATCATTGGAAACCATGGGTAATCCCATTTGGTTCATTTCCATAGATGTTGGGGTGGGTGCACATATGTTGTGATGTCCCTTTAGCCCTACCTGCA TGCACAAGATATAAAAATCTGACTTTATACTCTATATTTTGGTTGAGATTTAGTTTAATTCTATTATGCTAGGGAGGTATTGATTTGTGCCTACCTTTTA TTACGAAAAGAACGTCAGATTTGTTTGAATTTGCTATGGGTCTTTGAATTTGGACCTCTCTGTAGCTATTGTGTGTTGCTTTTGTGGGTAAATTTTATCT AAAATAAAACTTTATTTGTTGGATGAGTTAAAATAGTTTGTAGGATCTCTATCCTGTGCTCGGTATTGTGGATTAAATGCTGGAAAGGTAGTCACTGTTT ACTGTAGTTTGTATGGACTATGAATCAGGCAATCATATATTTGTCAGTTTTTCTCCTGAGCCTAGATCAAGTGTTTAGTTTTTATATATAAAAAAATATT CAGTGGTGTTTGCAGTAACAACTTAATAATAGGGAAATTTGTTATAAACTTGCGGTGGAAAGATGGGGAGAGTGTGAATTATGTTATATAAATTAGGGGA GTAACCCTTTCTTTACCCCCCACCCCCAACCTTGGGTGACAAATAAATTAATGTTTCATTGCATGTGTTCTCATTTCTGAGCTCTACAATTGAGGGTGCT GCCTCTTGTTCTCTTTTTCAAATATGGGCATAAACTGTGCTTCATTTTGCTCCTTGTGCTTGATGCTAGAGTTTAGAACTATATGCATTAATATACTACC CCCTCCCCCCTAACAATTATAATAAAATAATTGCAATCATTATACTAATCCCCTTCATTGTTATTTGAGGCAAAATTATTCTTCAATTTAATGGTTTAGG ACAAGTATTTTACTACAATGTCATCTTATAGGCCAATTAAGATTTAAGATCTATTCATGCGTGGTGAACTCACTTGTCATAAAAAATGAATTCTTTATGT AGTCAAAATGCCATTCAGCTTGAGGAGAAGGAGAAAAGGGAAAAAGAACTGAGAGTGAAGATTTTTGAGGAAGCTGAAGAGTATAAGTTGGCTTTCTATG AGAAAAGGAATCTTAATGTTGAGACTAACAGGATTCAAAACAGAGAAAGGGAAAAGTTATATTTGGCTAATCAAGAGAAGTTCCACAAAGAGGCAGACAA AAACTACTGGAAAGCGATTTCAGATATCATTCCTCGTGAGGTTCCAAACATTGAGAAGAAAAGAGGCAAAAAAGATCAAGAGAAGCAGCCATCCATTAAG GTCATCCAAGGCCCAAAGCCTGGAAAACCGACCGATCTTTCTAGGTTGCGGCACATACTGTTAAAGCTGAAACATACACCACCAGCTCACATGAT BLAST |
Tissue | flowers |
Gene name | LI_gene_55796; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_250424
Blastp | Clathrin light chain 1 from Arabidopsis with 72.13% of identity |
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Blastx | Clathrin light chain 1 from Arabidopsis with 72.38% of identity |
Eggnog | clathrin light chain(ENOG410YB93) |
Kegg | Link to kegg annotations (AT2G20760) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445657.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |