Ll_transcript_249684

• Id Trinity: FTRINITY_DN55944_c0_g2_i29
• Name Transcript: Ll_transcript_249684
• Sequence: GGATACCGAACCACGTGGAATCAAAAATTTCTTAGGTCAAATTTGAGGCGCCATGTATGGAATGATGACTATTAGCATCAATTTTCCTCTGACTCAGATA CCAAAAATGAAAACATGGATTACCAATTCAAAATCAAATAATAAAAAGTTTTGGCCGTCACACATATTCCACAACCATAAAGGTAAGCACCCAAACACGG TCCTAAACATTTCGCATTACCCTAATATAGGACTTTTCATTCCTTCGCCGCATGTTCCCCTTTCTTTCAATTTCTCACTCTATTTGAACTAATACCACTG TGCTGTGTTCTGCTCCTGATATAAACCCTATGGCGCTTCGTTTTGAGGTTCACCTTCCAATTATATTTCTACTCAGCCACATTGTCTCTTGTCTTTTTGT TATGCTTGAATATTTAACTGCTTCGCTGTTCTTTTTTGTTTTCTTTGAATAATTTAATTAATAGGAATCTGTTTATCAATTTTTGATTTTGTTCAAGTGA CAAGGGTTTTTGTTTCCCTAAGTGAGTGTTGTGAATGAAAAAATATACATTTTTATTATAAATTTAAATGGAGAGAGTTGTATATTTGTATGACTTTTTT TATATAAAAAAACACTTAATTTTGTAAAAATATATTCCTCCTTTTTTCATTCCAAAAAACCACTTCCTGCAATTTAATTTTTGGAGGGGAGTGAGAAAAT GTCTGAAATTTTGGATGATTCTATATACAATAGCTATGAAGCTCCCATACTGATACGAGTATGGGATATGATATGTGTCCAATATGTGTATACATATATT ATTGAAAATGCAGACATGTTTGAGATACACATATATGCACATTAAAAGTTTATAGAACTGATTAGTGCCCATAAATAAGAATAGCATTGATACCATTTAA TCCGTGATCAACGTTATGTAAATGCAACTTCTCTTCTTTCTCTGTACAAATATACATGCTTTGTCTTTTTTCTCTCACTACAAGTCCACTTTTGTACATT GAACGTTATTTTCCCTTCTACTTAATTGATTATGTTTTATGTTTTTTTCCTCTTTCCCCCTCTTAAGATACGTACCAGAGAGTATATGAAAAGTATTGGA TTTATGATTTATTTAATTTTGAAAAAAATAATTTCGATACACTATGGATACGTATCAATGAAGAAGCAGAGAGATACATGAAAGATTGAAGTATCAATGT TTTCATGATGCAATAGAATAAGAGATAGACATGTGATTGCTGAAAAGCATTGTGTGCGCATGATCTTTTGGCATTTTTTATTTATTTCATAACTGTATTT CAGTTATTCTTTGAACTCCACTCTGTTCCCGTTGTCAGGTTCTTGCCAGGTTCAACCGAGCTCGTGCAGCTCGATTGACACTCCCTCACTTTGTGTGTGA AACGCCTTTATTTATGCCAGTAGGCACACAAGGGACTATAAAAGGATTGACTAATAGCCAGCTTGAGGATATTGGCTGCCAAATAATTCTTGGAAATACT TATCACTTGGCCCTTCGACCTACTTCGGAGCTTCTTGCGGAAGCTGGCGGTCTTCACAAATTTATGAACTGGCGGAGGGCAATGCTTACAGACTCTGGTG GCTTTCAAATGGTCTCACTGTTACATCTTGCTGATATCACAGAAAAAGGTGTGACATTTCAGTCACCAGTGGATGGAAAGCCGATGCTTTTAACACCCGA GGAATCAATTCAGATCCAAAATAGAATTGGGGCAGATATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATCACTGGTCCAAGAATTGAGGAAGCT ATGTATCGAACACTTAGATGGATTGACAGATGTATAGAAGCTCATGGGAGGCCTCATGATCAGAACTTGTTTGGTATTGTACAGGGTGGTTTGGATCCCG TGTTGAGGGACATTTGTATCAAAGGCTTGGTGGATCGCAATTTGCCTGGGTAGGTTTGAATTCATTTCAGCATATAAATTATGTATGACTTTACGCTTTG TTCTATTTCCAAAGATTTTATTTTGTGTGCTGTTTTAAGTTTTAACAACTAGATTTGACTGTACTAGCCAATTTGAACATCGGATGGCATTCTTGTGCGT ATGATCAGCCTCCAAAACTGACTTGATCAAATTGTTCTTAAATCATAGGACGGATTGGGAGGCTTCTGCTCTGATATTCTCTTTTTTCCATAACTGTTCT TTAGGAGGATTTCTTATCCTCCTCACTCTGTTATTCTTCTTCTTCATCTTAATAAATCTCTTCTATCCAAAAAGAAGCTATTCATGAATCACCCATGCCT CTGTATTTCCTCTTTAAGTTATAAATTAAAAAAATGGCAGCTCAGGGTACGAGGCTCACACCTTCTTAAACACATTTATTTTGTTATTGGAACATTTTTT CTATTCTACGTCCAAACTTCAGTTTTTTTATTTTTCTTGGGGACCATGGATTTGATTAATGGTCCAGTTTATGGTAATACATTGGTTTTCTGATCAGATT CTATTATTCATGGTAAGGGCTAGGCCAATGACAAAAAGAATTATTTTCCTCAAAGCAAACATTGATGAATTCTTCATATGATTAAATTTGAATGTTTTCA TCTTCTCCAGGTTTAGTAAAACTCACGGAGGCCCGAAAATTGAATAAATATGTATTTCTTTCTATTGAAAGGGAAATCTAAGATATTTTCTTTGTCGCAG CTATGCTATTGGTGGTCTTGCAGGTGGCGAAGATAAGGATTCATTTTGGCGTGTTGTAGCTCAGTGCACTGGTTCTTTGCCAGAGGATAAACCGAGATAT GTTATGGGAGTTGGCTATCCACTTGATGTTGTTGTTTGTAGTGCTTTGGGTGCTGACATGTATGATTGTGTTTATCCTACCCGTACAGCACGTTTTGGCA CTGCTCTTGTTCCTGAGGGAGTATTAAAACTAAAACAAAGAGCAATGGCTGATGACACCCGTCCAATTGATCCTACATGCCCTTGTATGGTTTGTAAGAA CTACAGCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCTATGGGATCTCAGCTTTTGTCATATCATAATTTATATTACATGATGCAGCTTAGTAGG GATCTACACTCATCAATAGTCGAGGGGAGGTTCCCAAAGTTTGTGTGTGACTTTCTAAGCAAAATGTTCCCAGAAGGCAATGTTCCTGAATGGGTCTGTA ACGCTATGGAGGTAGCTGGAATCGACATTTCTTCCTGCTGCACCTTTTCTGAAAGGGTCTGCAATGCTAAGGTGGCTGGAATCGACATTTCTTCGGACTG CACTCTGTCTTCATCATGCGGAGAACATGATTCTGATAATGTGTCAGATAAATATGATGAGTTAAAATTGAAGTTGGAGAGATTAAGAAACAATGAAGAT GCATTGAGGAGATAATATAATTTAGTTTAGATTATGATTCTTGCAGCATAAATTTTGTAACCTAGTTATGCTGCTTCAGTAAAAGTTATGAAAGTTATTA GAACTTTTTTGGTTCCTTCCATTTTGGCTTTTTATTAGGCACATTCAAGATTAATTTTGTATCATATAGCAGTGTAAAAGATGGGTAGGTAAGTAGAATC TTGATTCTGGCTGTGTTCCTATAGAGAACAATTGATGAAACGTTTTTACTGATAGTGAAGCTGGAATGTAACTCTTACATTCACAAGTTTGCACAATTTT ATTATGATTACATATTTGTTCAGGCCATTCTATGTAGAGCACTGATATTAATTTATTTTAGACGTCACTGCTATGGAACAGAGGTGAAATGATGTGAATG ATATAATCTACAATATCAACAATTTCTATAAATATAACATTGTAGTTTATTCCATGCAATGTTAATGCTGATTCATGACTTTCCTTCTCTCATGCAGCTC AAACCGTATGTATCTCAGTCCTATCAAGACCTCTGAGGCTTCCTAAACGACTAAATAACCAAATTGAATAGCATAAGGTTGTTTTCTTTGTAACTGCAC
• Tissue: flowers
• Gene name: LI_gene_55900;
• Additional information: details;

Expression of Ll_transcript_249684

FPKM

• FPAB: 1.3
• FPNAB: 1.3
• LF1: 0.5
• LF2: 0.8
• LF3: 0.9
• LF4: 1.2
• UF1: 0.4
• UF2: 0.6
• UF3: 1
• UF4: 1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_249684

• Blastp: Queuine tRNA-ribosyltransferase catalytic subunit 1 from Danio with 63.69% of identity
• Blastx: Queuine tRNA-ribosyltransferase catalytic subunit 1 from Danio with 63.54% of identity
• Eggnog: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (By similarity)(COG0343)
• Kegg: Link to kegg annotations (393985)
• CantataDB: Link to cantataDB annotations (CNT0000446)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416068.1)
• Pfam: Queuine tRNA-ribosyltransferase (PF01702.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;