| Id Trinity | FTRINITY_DN55963_c3_g5_i1 |
|---|---|
| Name Transcript | Ll_transcript_248234 |
| Sequence | AACAAGAGATAACTAGAAGCATTGTCAGAATTGTGTGCAGAGAAGAGAGAGATAGCAAGAGAGAGAAATTGAAAAAGTTGTTTGTTTCAGACATGGCCAT GCCTAAAGAGAAAGATGATAAAGAGTTTCATGGGAAGAAGAGGCTCAAATCCATGAGGAATGAACAAAAACAAGTTGTTGAAGTAGCAGAAGAAGAAGAA GATCATGCATCAAGAGTAGTAGAAGAAGAAGAAGAAACTGAGCTTCCACTGCAACAAGGGTTATTCTTCTACCCAACAATACCATCATCTTTTGTTGTTT GTGATGCACTTGAACTTGATTTTCCAATCATCTATGTCAACAAGGTCTTTGAAATCTCCACTGGGTATCGTGCTGATGAGGCCTTAGGTCGAAACTGCCG GTTCTTACAGTATAGAGATCTTCGTGCTCAGAGGCGGCACCCTTTGGTGGATCCTGTTGTTGTATCTGAGATTAGAAGATGCCTCCAGGAAGGTATAGAG TTCCAAGGTGAACTTCTGAATTTCAGGAAGGATGGTACTCCTTTAGTGAACAGACTGAGACTCGCACCAATTCATGATGATGATGGAACTGTAACACACG TAATCGGTATCCAACTATTTTCTGAAGCAAATATAGATCTGAACCATGTTTCATATCCAGTTTTCAAAGAGACTTGCAATCAAGATGTTGATAAGAATAG CAAGTATTTTCCGAAGAGTGGACAATCATTGTATATTCAGCAGCACCAAGAGATGTGCGGTATTCTTCAGCTCTCTGATGAAGTATTGGCTCACAACATT TTGTCGCGCTTGACACCAAGGGACATTGCATCCATTGGATCTGTATGCAGGAGGATTCGTCAACTAACGAAGAATGAGCATGTTAGGAAGATGGTTTGTC AAAATGCATGGGGCAAAGAAATGACAGGTACATTGGAACGGATGACCAAGAAGTTGGGATGGGGTCGTCTGACTCGAGAACTTACAACTCTCGAGGCTGT TTGTTGGAGGAAAATGACAGTTCGTGGTGCAGTGGAGCCTTCACGCTGCAACTTCAGTGCTTGTGCTGCAGGAAATCGGCTTGTGCTGTTTGGAGGTGAA GGAGTAGATATGCAACCTATGGATGATACTTTTGTTCTAAATCTCGATGCTAAAAATCCAGTGTGGCGCAGGGTTAGCGTGAAAAAATCCCCACCTGGAA GGTGGGGCCACACACTCTCGTGCTTGAACGATTCTTGGTTGGTTGTTTTTGGTGGATGTGGTAGGCAAGGATTGCTCAATGATGTGTTTGTTATCGATTT GGATGCTCAACAGCCAACATGGACTGAAATCTGTGGTGGAACCCCACCACTTCCGAGATCATGGCACAGCGCTTGCACAATTGAAGGGTCCAAATTGGTT GTCTCTGGTGGATGCACAGATGCCGGGGTACTTCTTAACGACACATATTTACTTGACCTTGCAACAGAGAATCCAACATGGAAAGAGATTCCAACTTCTT GGGCTCCTCCTTCTCGGTTGGGGCACTCACTCTCGGTCTACGGAAGAACGAAAATTCTCATGTTCGGTGGACTCGCCAAGAGTGGACACTTGCGCTTACG ATCCAGCGAGGCATATACCATCGATTTAGAAGATGAAAAGCCACAATGGAGACAACTAGAATGCAGTGCCTTCACTGGATCGGCTAGTCAAACTGCCGTG GTTCCGCCTCCTAGACTTGATCATGTTGCTGTCAGCATGCCGTGTGGGAGGGTCATTATCTTTGGTGGTTCAGTTGCAGGTCTTCACTCACCATCTCAGC TGTTTCTCTTGGACCCTTCAGAGGAGAAACCATCATGGAGGATACTCAATGTTCCGGGACAACCGCCTAAATTTGCATGGGGTCATAGCACTTGTGTGGT TGGAGGGACAAGGGTGTTGGTATTGGGTGGGCACACTGGTGAGGAATGGATACTGAATGAGGTGCATGAGTTGTGCTTGGCAAGTAGACAAGACTCTGAG CTGTGATCAATGAGTTGGCAAGTTGGCAAAACTCAATTGCATAAACCAAAACTCTCTCAAGACAAGTTTTTGGTTACAAAAAGAGTTTTGGTTGGTTTTC CTTTCTGCCTTTAGCAGTTTGGTTTTTGTTATGAACTTTTTCATGATTGTTGTATGACATGTACATTTTCCTATACTGTCTATGACACTAGGAAACTTCT GTACATCAAAAAAAGAGTTGTTAGTAAGTTAGTTGTTGTAATCACCCACCCTTTACAATTAGTTTTAATATATAAGCAAGTATTTATTTTTTGTTTAAAA AAAAAAAAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_56088; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_248234
| Blastp | Adagio protein 3 from Arabidopsis with 80.89% of identity |
|---|---|
| Blastx | Adagio protein 3 from Arabidopsis with 82.45% of identity |
| Eggnog | Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light-regulated protein degradation of critical clock components by targeting them to the proteasome complex(ENOG410XRGE) |
| Kegg | Link to kegg annotations (AT1G68050) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422045.1) |
| Pfam | PAS domain (PF13426.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |