| Id Trinity | FTRINITY_DN55979_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_248306 |
| Sequence | TTCTTTCTCAGTGTGCCAAGCTGTGAGGGTATCTCACTTTCTGTCCTAGACTACATTTTTAGCTTGGTCAGCCATATGGGTAATGATTTTTCATAAATGC AGCTAGCTGCTCCCAACTCTTCTACCCTGTCTTGTTTTCTAAGACTCCCTCATTCATGCTTTATGTAGGTGAGCCCTTTTGGTCCACTCCTCAACAAAAC TTCTGCTACAAGAAACCACCTTATAAAATTACACCAAACTCCTTAGAAAGTTTCAAACAAATTTACCTGTACAAGTATTCTAACCACAATTAAATATGGA ACTTTGAAATAAATGGTTAAGGGGAATCTGATTACATTAATTAAGGTGGGGTGACAGGTATATATGTGTGTATATATATATATATATGTCTTTGGAAAAA AAATCTGGTCTATACATGAACTATTGATGCCCCATAGTGAGAAACAGTAGTTAGCTGAATTTGCCAATATACCAACTTAAGAAAATAGCTACCTAACCAA ATTAGGCTCACCAAGATTCTTCACTAAGTTTGCAGATGAAAAATAAAACGGAAATGTGTATAAAAGGCTTAACATTTATAGTTTTATACTCCTGACGTAT AACAACTTTGATGGTTACATAATCAAATTAGCTTTTGAGTAAAGGTGGAAGTTGCTAATAAAATAAGCTATTGGTTTCATACCCTTAAAAGCTAGTATTG TTTATAAAGCACCCGAGGCAGGGGAAACAGTGCCATCATTCTGAAGAAAAGAGAGTTGACAAGGTAGAACAGAAGAGTATCTTTGTTTGTAGTGCAGCAA TGGCAACACCAAAAGAGTCATATGAGAATCAACAACTAGCGATTGTGCAACACGTGAGGAACTCGGGGATGATTAGTTCCAACCCGAGCCCATTAATGGA TGATAAGGAAGAGGAGATGTCAAGATCAGCTCTTGCAATGTTCCGCGCAAAGGAAGAAGAATTCGAGAGGAAGAAAATGGAAGTGAGGGGTAAGGTCCAT GCTTATCTCGGTCGAGTGGAGGAGGAAACTAAGCGCTTGGCTGAGATTAGAGAAGAGCTTGAGGGTCTCATAGATCCATTGAGGAAAGAAGTTGGAATAG TTCGAAAGAAGATAGACAATGTTAACAAAGAGTTAAAGCCAATGGGCCAAACATGCCAAAGAAAGGAGAGGGAATACAAGGAAGCCCTTGAAGCTCTCAA CCATAAAAACAGGGAAAAAGGTCAACTTGTTACAAATCTAATGGAGATGGTGAACGAAAGTGAGAAGCTGAGGATGAAGAAACTGGAGGAACTAAGCAAA AACTTAGACACTCTGAAATGAGATGCTAATAAAAGTAACCAACAACCCTTTTGTATTGTATTCAGAGTGCTGTAACAATAACTAGTATGGTTGAGCTTCA CATCATTTGTGATTTCATTGTATTTTGCTGACTTAATTAGGAATGAATATCCAGCAAAAGTGTGCATTACAAACCTAAATTCTAAAGTGTACAAATATTC TTGTCATTTTATTATGTTATGAGTCCATTTTAACTCCATGGGATTAAAGTTTGTTTTTTGTTGTTGGCGGGTTAATGAGGTCATGGAATGCAAATTGAGT ATAATAAAAAAAGGTTAGTTAAACT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_56237; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_248306
| Blastp | RAB6-interacting golgin from Rattus with 32.79% of identity |
|---|---|
| Blastx | RAB6-interacting golgin from Rattus with 34.34% of identity |
| Eggnog | Golgin, RAB6-interacting(ENOG4111VTM) |
| Kegg | Link to kegg annotations (304923) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450767.1) |
| Pfam | Transcriptional activator (PF04949.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |