Id Trinity | FTRINITY_DN55990_c1_g1_i10 |
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Name Transcript | Ll_transcript_248970 |
Sequence | GACGGTTTCTATTTCTTTCAAAGTCTCACATCAACATAACATAACGCATCAACTCTTCTCTCTTCTTTATCCTCTCACAATTCCCTTCTCTAACTGTAAG TTCTTTCATCTCATTTTCACCATTTCTGCTTTCATCTTTTTCTTTATGCAATTCTCTACTATACAGTATACGATTCATATACATATTTGATAGATTGTTA CGGAATCATTTTTTTTCTTTTAGATTTCATGTCTGTTTCACTGAATAGTTGTTTCATGAACAAGGTAATCACCATTCCAGTTTGTTATAGCTGTGTTGCT GTGTGTAATTGTGATTATAAATCTGAGCTTACTGCGACTTTCTAAATCTAATTTATGCTATCAATTCAAATTTAGAAGTAGATGAATTATTTGTTTCCTC TTCTGCCTTCAGTTGGTGGCACACAACAAAAATAGAATTATTTGTCTCTGGGTGCATGTTCAGTTTTTATTTATAGAGGATGTGGATTAATATGGTTATT TTTATGCTCTGGTCATTGGTATTAGTGATTAGGCAAGTTTTTTACACTATCAATTACTTATATATATTACCATATGTGACCTTTGAGCATTGAAAGTCAT GAGTTCAAATTCTGCAAACAACCTACTAGCTTGCAATGACTCTCCATAGACCGAGTCTCGTGCACTGGATCGTCCTTTTATGTGACTTTTTGAAATGGCT GATGTGAGAGCCAGATGCTGTTTTGTGGTGTGACAGCGTATGATTGGATGACAATGTAAAAAATGTTTGGGAAATATGGCTTAGTATGAAACCATTTTCC ATCTATACACAGATAAGTGTTTTATTTTTTTATTTGACTTTTTCAACTCAAGTGGGTTTTTGATTGGGCTACATGCAATTCATAACAATTCATTGGGATT TTATTGGAACCATATAGCAATGCTCAAAACTTTTAAGGAAAATTAATAGTATGAATGTGAATTCATAAACACTCAGAATCATTTTCATTTGACAGTATCA CCTCCTTAATTCCAAATTTAATTGAATACACCACCAGCCAATTGAATTTGTCAAATTTCGTCATGGGATATGAATTGCCGAATAACATTGCTGATACTTT TATATTAATAGTGCATCATAATTAGGTCCTTAGTATTGAATGGCTAATTGTGCCATACTGCCATAATTATCTTTTATATTTTGGTTTCTTGCAGTTCTAG TAGTTATAGGTTAGGTTGTGAACTGTTGCTCGCTTTCACCATGGAAAATAGAGAGTTAGCGGAGACAAAGGAAACAATATCTCAGGCTGTTGAGAAGGTG GAACTAGATGCTCTAGATATCCAAGGTAAATATCAGGATAAGCAATCGAATGAGACAAAAACTTCGGATATTAGTCATAATGGCCATGGATTTGACACTG AACAAGGTGATAAGTCAAACAAGATAAATATAGTTGGAGAAATCGAAACTGAAGGCAATACTGTTGCACAAGAGTATTCCAGTGATAAGGTGGATGCCAG TGGAGATTTTGCGCCTAAAAGTCAAGAGGTAAACACAAATGATGTTGTGCAGAATGACTTGGCTAAAGAGGAGGATGATAGTAGAGACAAGGAACCAAAG CACATGGATCAAATTGCAGATGAAATTCCAAGTGAGGACCCCAATTTGGAGCCTGTATTTGATGGAACAGAGGTTCCCGGGATGGAAGCTTGCCGGAGCT CATCTACCCGTAAGTTGGACTCTGACCAGGAGACTCTAGTTGTGGTTGAGAAGGCAGTGGCTCTTAAAAATTTTGTCAAGGAGAAAAGCGCAGTAGCAGT CTCCACTATGCTGCGCCGTCTTTCTGGGAAAAGCGATGAAGGTGCTGCGGGTAATTTTGATGATGAAGGTAAAGATGTTTCAGGCTTCTCAAATAACAGT GAGCCCAATGCTGTTTCTGAGAAGTCAGTAGAGAAATTTGACTGGAATCCCTTAAATTATCTTAAGAAGTCATCTGATGCTGATTTGGAAAACAAAACTG AGCGGAGGGATTCCCTAACCAGAGGTCCACCAACACCAATAGCCATGAAAGGAAGGATAATACTATACACAAGATTGGGGTGCGAAGAATCTAAACAGGT TAGGCATTTTTTACATATGAAAAGGCTTAGGTATGTTGAAATCAACTTAGATGTGTACCCGAGCAGAAAGATGGAGCTGGAGAAGATTTCTGGGTCTACT TCTGTTCCCAAGGTTTATTTCAATGAAATACTTATTGGAGGACTGAGTGAGGTAAAGACCTTAAATGTGTCTGGCAAGCTTGATGAGAAGATAGACTTTC TTATTACTGAAGCACCAATATTTGAAGCCCCATCACCTCCTCTACCTGGAGAGGATGATGAGTCCAGTAGTGGAGCACTTGATGAATTGGCTCTAGTTGT CCGCAAAATGAAAGAAACTATTGCTGTGAAGGACCGATTTTACAAAATGCGCAGGTTCACTAACTGTTTTCTTGCCTCAGAAGCTGTGGACTTCTTATCA GAAGATCAATATTTGGAAAGGCAAGAGGCTGTTGAGTTTGCACAAAAGCTTGCTAGCAAATTCTTCTTTCATCATGCTCTTGATGAGAACATATTTGAGG ATGGCAATCATTTATATCGGTTTTTGGATGATGATCCAATTGTGGCATCACAATGTCATAACATTCGAAGGGGAATACTTACTGTGAAGCCTAAACCTAT AGTAGAAATTGCGTCAAGGCTGAGATTTCTGTCGTATGCAATGTTTGAAGCCTATGTTTCTGAAGATGGACGTCATGTTGATTATACGAGTGTGCATGGA AGTGAGGAATTCGCAAGGTATCTGAGAATAGTCGAGGAGCTCCAAAGAGTCGAAATATGGGACTTGTCTAGAGAAGAGAAGCTCGCTTTCTTTATTAATC TTTATAATATGATGGCTATCCATGCAATATTGGTATTGGGACATCCAGCTGGAGCACTCGAAAGAAGAAAATTATTTGGAGAGTTCAGATATGTTATTGG TGGGTCCACCTACTCACTTTCAGCTATTCATAATGGCATTTTGAGGGGAAACCAGCGACCACCTTATAACCTTAAGAAGCCATTTGGTGCAAAAGATAAG CGGACAAGGGTGGCGCTCCCTTACCCTGAGCCTCTTATTCATTTTACTTTGGTATGTGGTACCCGGTCTGGGCCTGCACTTCGGTGCTATTCTCCTAAAA ATATTGATGAAGAATTAATGGATGCAGCCCGTAATTTCTTGAGGAGTGGAGGTGTTGTAATTGATTTGACTGCAAAGACTGCACAAGCTAGTATGATCCT TAAATGGTATAGTATAGATTTTGGCAAGAACGAGGTAGAGGTACTCAAGCATGTATCAAACTACTTAGACCCAGCTGACTCGGAAAAATTACTGGACTTG CTCGCTACTTCGGATTTGAAGGTGACGTATCAGGCTTATGACTGGGGTTTGAACGGCTAGCATGTGCTATCAAAGGTTCTAAGTTTTGAAAATACCACAA TAGATTCATACTGATTTTCTATTAAAAGTTGTCATTCAAGTGTCAACGTTATATGTTATTTCACACATCTCTATTGGAAGGCACATTAGGCAGACAATTC GGTTGAGGAAATAATATGCTTATTTCCTGTTCTGCATTTACTACCTACAATTACATGTTCGTATGTTTTATTTGTACAAGAATACTTCAAATGTACTCAA CTAGAAAAGCTTGAACTTGTGATGCAGCTGCATCACTGTCTCTGGGGCTATTTGGCTAGTGAGTAATAATACCTACCATTGCGCACTCTTTTGGTTGCAC AAATCACAACCTCATTCCATTTCTGAATTTTAAGTGGTCACTATTAAACTTCATGTTTAATTGAGATGGATTTACTTGTACCTTTAGGTACATTATGAAT ACATTATGTCATAATTTATAAATTATGTATCAAGTCTTGTAAGAAATGTATTTTGTTACACAATTTTTGTTACTACCTGCTTTAAGCATTATACTGTGGC BLAST |
Tissue | flowers |
Gene name | LI_gene_56343; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_248970
Blastp | DEP domain-containing mTOR-interacting protein from Mus with 36.14% of identity |
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Blastx | DEP domain-containing mTOR-interacting protein from Mus with 36.14% of identity |
Eggnog | DEP domain containing MTOR-interacting protein(ENOG4110T1J) |
Kegg | Link to kegg annotations (97998) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417193.1) |
Pfam | Glutaredoxin (PF00462.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |