Ll_transcript_249409

• Id Trinity: FTRINITY_DN55996_c7_g2_i1
• Name Transcript: Ll_transcript_249409
• Sequence: CGTTAACAAGAAACGAGTCCATCATCTGCTTTCACTCTTCACACCGTAGCTTTTTGATGGCTAACCGCGTTTTCTCCGCCGCAACCAAACGTATCACTTT CATATTCGGCGCACGATGCCATTGGAGCTCCGTCGCTTCTACATCAGAGGAGTCATTCCCGCACAGATTGAAGAACCGAATCTTAGGACTCAAATCCTCT ACAAGAAGTGCATTTCCCGCGCTTCAGAATTGGGTGGACCAAGGCAACAATCTTTCACACTTCCAACTTAGACGCATTTCCAGGATACTCCTCAAATCGA AGCGTCATCATCACGCACTTGAGGTACTAAAATGGATGGAAAACCAGAAGAATTTTCATCTAATCCCAGCTGATCATGCTATGAAATTGGAAATAATCAT TAAAACGTATGGTCTATTGGAAGCTGAAGAGTACTTTATGAGTATATCTGATTCAGCTTCGAAGAAAGCTGCCTGTCTCCCCCTCCTACGTGGTTATGTA AGAGATAGGGACACTAGTAAAGCTGAGACTTTCATGGTAAAGCTCTATGATCTGGGGCTAATGGTGAGCCCTCACCCTTATAATGAGATGATGAAACTGT ATTTGGCCACATGTGAGTACAGTAAGGTACCCCTTGTTATTCAGCAAATGAAGCGAAATAGGGTACCATGCAATGTTTTGTCCTACAATCTTTGGATGAA TGCTTGCGGTGAGGGAGAAAGATATGGTGTTGCAGCTGTAGAGAGGATTTTTAGAGTAATGCAAAATGATGAGAATATTGAATTGGGTTGGAGCAGTCTT GCTACTTTAGCCAATGTCTATATTAAAGCAGGACAATCTGACAAAGCCATTCAGGTTCTCAGATATGCAGAAAAGAAACTATCTACCTGTAACCCTCTTG GTTATTTCTTTCTCATAACACTATATGCCTCTTTGAAGGAAAAGGAGGGAGTATTGCGGCTATGGGAAGCTAGTAAGGCAGTTGGTGGAAAAATCAGTTG TGCTAACTACATTAGCATACTAACATGCATGGTGAAGCTTGGGGACATTGTACAAGCCAAGAGAATCTTCAGAGAATGGGAGTCTAATTGTCAGAAATAT GATATCAGAGTCTCTAATGTTCTTTTGGGTGCATATGTACGGAATGGATTAATACAAGAAGCTGAAGCATTACATGTCCATACATTGGAGAGGGGTGGTT GTCCAAACTATAAGACATGGGAGATTCTCATCGAAGGATATGTTAAAAACCAAAAAATGGACGAGGCTATTATTGCCATGAAGAGAGCTTTGGCTTTGTT AAAGGATTGTGATTGGAGGCCACCACAAGGACTTGTATTAGCCATTGCAGAGTATTTGGAGAAACAAGGAAATTTTGACTATGCAAACGAGTATGCTACA GAAGTCCACAATTTTGGTCTTGCAAATTTACCATTGTATAAAATATTGCTTAGAATGCACATTTCTGCTAACAAACCACCTTTCCATATCCTTAAAATGA TGGACAAAGATAAAGTTGAGATGGATGATGAGACTCTTTCCATTCTTAACGCCTTCACTGGGTAGGTAACATCAAACCCTCTATGTTTTCCTGATTGCTT GTTCTTGCAAGATGAGCAGTTGCTCCCGTCCTCCTGAGAGTAGTTCGTGGTGTGCATGTGTTCAGGAGGAATTGTTTGGAGGTGAAGCAGTAACTTGGAG TCACTTTCATTTATGGGGTAATTTCTTTTCTTAATGGTAAAGTTATTTTTTCATGCCTATGGTATTTATTTAATTGAAAGAAGAAACCAATAAGCAACAT TGTCACATAAAAGCTGGAAGGATGTGCTGTCCTTCATACAGATTATCAGCATACTAGATGCCTCAATATCTATGTTCCTCTAACTTTGAAAGTTCTGCAG GATTTAGGAAGAAAGTAGCGAGCTCTTTGATTTGTATTTGAAGTTCATTTCCCTTAAACTAAAAGAAATATGGTTTACTATAAATCAGTAATATCAGCAT GGTTAACATTAGTCTTAGCGATTTCAGTTAGATTAGAGACAAACCTTTTTGTCTTTGTTGTTGTGTGATCCATAATAGGATGCTAACTTGCAGAACAAAA AATATAGGTTCCTGTCGTACCTTTTTATCCGCATATTTGCCAGTTTTCATCTTTTCAATTATTGAAACTAAACGAGAATATATGTTAATAACATTAAAGC TTATGGTATGTTTGCAGAATATGAGAAAGAGGATGGCCA
• Tissue: flowers
• Gene name: LI_gene_56395;
• Additional information: details;

Expression of Ll_transcript_249409

FPKM

• FPAB: 0.1
• FPNAB: 0.2
• LF1: 0.2
• LF2: 0
• LF3: 0
• LF4: 0
• UF1: 0
• UF2: 0
• UF3: 0
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_249409

• Blastp: Pentatricopeptide repeat-containing protein At5g27460 from Arabidopsis with 52.23% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g27460 from Arabidopsis with 52.38% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G27460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415822.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;