| Id Trinity | FTRINITY_DN56001_c2_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_71539 |
| Sequence | GGGGTAAAAGCATTAAAGAAGAAGTGAATGGAAGAAAAGAAATGGAGCGAAGTGAAAGCAGAGAAGAAGAGACAAAACATCAAAATCAAAAGCGAAGAGA AAAAAATGAAGGAAGATTGCGTAACCTCTCCCAATCCCAAATCACCTTCTTCTCCTCCAACACTTGCTCATAGCTCTGCCGGTGCATCGTCGCCTGCCTT TCCGGCGATTAACAGAGAGAGTCGCGGCCACGGTAGCGAAAAGTCGAATGCTGATTCTCAATTGATGGTTGATTTGGAGCAGGGAGCTTTGAATCGTTCC TGCAGGCCCTGGGAAAGGGGCGATTTACTGCGGCGCCTTTCAACGTTTAAACTGGCCGGAAAAAAGCCCAAGGTTTCTGGCTCATTGGCTTGTGCCAAGA GAGGATGGGTGAATGTTGATGTTACTAAAATCGAGTGTGAGTTGTGCAGTGCACAGTTAGATTTTGCTTTGCTCTTAACTTCTGTTGAAGCTGGTACTTT CAGTGAAGAAATTTCTAAACTGCTTGATAAAGGACACAAAGTTACTTGTCCTTGGAGAGGTAACAGCTGTCCAGAAAGCTTGGTGCAATTCCCCCCTACT TCATCTTCAGCTCTAATTGGAGGTTTTAAGGACCGGTGTGATGGACTCTTGCAGTTTTTCTCCCTCCCCATTGTATCTTCATCTGCAGTTGAGCAGATGC GGCTTACACATAGTCCTCAAATTGATCGATTTCTTGCTCAACTACAAGTTCCAACAACTGGAGAGTTGGGTTACAGAGTGGAAGATGTATCTGGAATGGG AGTTTGTGGAGAACATGCTCTTCATTCATATTCTTATGCCCAAAAGCTCATAAGTCTCTGTGGATGGGAGCCAAGGTGGCTTCCTAATGTGCTTGACTGT GAAGAGCATTCTGCTGAATCTGCTAAACATGGTTACAGCTCTGGTCCAGCCAAAGGTTCTGCACCAGATCCAGCTCTGAGAAGGAAGGAGTTTTCAGCAT CATCAAGGAAAGATGCTGGAGATAATGATGTACTGGGTTCCGAATTTAACTGTGAATCTAGGTCACCTTTGTTAGATTGTAGCTTATGTAGTGCCACCGT CAGAGTATGGGAGTTTTTGACTGTCCCCCGCCCAGTTCATTTGGCTCCCTGTGGTATTGATACCCCTCAAGCGAGCAAGAAAATGACATCAACTCGAGGA ATAAGTGCAGCTAGTGGTATTAATGAACGGGCTGCCGTTGATGGTTTTGAAAAAGAGCATACTGGATACCGTGATGATGCTGCAACATCGGATAAAAGGC AACTTGTATCCAAAAAAAGTTTAGATTTAAATCTTAAAATGGCGAGTAGGCCATCCTGTTCTACCCCAGATCATGTGCAAGATGCCAATAATGGAAGAGA TTTAATGATTGGGCGGCCTTCTGGAAGTGAAGTTGGTGATCGTGCAGTTTCTTATGAATCACAAGGCCCCAATGCACGCAAACGCAGGTTGGAAGATGGC AAAATAACAGTGGCCAGGCCACATCTAGGCATGCAACAGGCTGATAGTGCTGAAACAACTAAAATTGACCGTGAATATGATGAAACCATTGCTGGTCAAC AGTTTTCAGCTGGCCCGTCCAAGCGTTCCCGTGATACAAATCTTTCAGGAACTTTCCAATTTCCATGTAGAAAAAGTTCTGGTGGTGTCCCTAGTAATTT GTTGGATGTTCAAATAGAAGCAGGTACAAACAAAGTTAACCAGTTGAATACAGAAAGGGATCATGTTATCGGAACCCTATCTACCAGAAATTCCACCCAC ACATCTTCTATTATTGCAATGGATACAGTTTATCACAGCTCAGATGATGAATCAATTGAAAGTGTTGAAAATATTCCGGTAAGTGATAATGCTGTTAATT TCCCTTCTGTTGATTTGAATGAAACATCAGAGCTAAACAATAGCTATCGGGCGCAGCAGAGTGCTTGTTTCCAACCGCTTTTAGATAGAGCAGGAAGAGA GACAGGTGTTAGTAGTTCAAATGCTTGTGGGGAAGTTTTGAACACAGAGATATTGACTGCCCATAGGGATGGGCCTAGTTTTGGTATTTGTGGGGGAAGC GTTGGCATGGGTGCAAGTCATGAAGCTGAAATGCATGGGACTGATATGTCAGTTCATAGGGGTGATAGTTTAGGTGATGTTGAACCAATTGCTGAAGTCA TTGAAAATCAGGGCCAAGCTGGTGAATTTGTGCCTTATCATGAACTTGTTGGTCATTTTGTGCCTGAGGAAATGAGCCGAGAAGATTATCAAGGGGATAG TCAAGCTCTAGTGTCTCAATCTACACCAAGAACTGATAGTGGCTCAAAACTAATAGTTTCAACCAAAGTTGAATCTGTTGAAAGTGGTGAGAAGCCCAGT GGTAGCATGCAGATGCCGAGCTATGAAAATGGTGCACATCCATCTCTTTCTTGCAATGCTGTTGTATGTTCAGCCTATGAAGCATCCAAGGAAGAAGTTA CTCAGACTAGGAAGGGGTCTCATAATGATGATGGGGCATGTCATGAATCAGGCTATTTAGGTGCTGATGTTGTGGGGACTCCTTACAGAGACAACATTAA TGGAGGTGTTGAATTTAATCCAATCAAACTACATAATGACTACTGTCCTTGGGTGAACGGGGATGTTGCTGCTGCCGGTTCTGATAGTCCTTTCTCTAGT TATAGTGCGAGTAATGTAGCTCTTTGTGGCTGGCAACTGACATTGGATGCCCTGGATTCTTTCCAGTCTCTTGGACACCTCCCAGTGCAAACTCTTGAAT CTGAATCGGCAGCATCGATGTGCAAGGGTGACCAACTCACTTCTACCCAAAAATTGTTAGCACACAACTCCTAGTATGAAGCCATGGAAGAAGCTGAAAC TTTCTTGAAGTTTTCACAAGTTTCAGTGGATCTTTTACTTCATGAATGTGTAGTATATGTCCATAATAAGGTTATGTTTTTTATTGGTTCTGTCCAATCT TGTTCTTTCTGATTTCAGTTTTGACACTGTTATACTATTGGATTTTGTATTGTTAGTAATTTTATAAAAGTATAAAGGGCTTGTTGAGTTGACTTATAGA AATTAGAAATTGATGTTATATGATAGATAATGTTATTAAATGATGAAGTTGTTTCATTACACCAAGGTTGTTTGAGGTCATTTGTTGTCCTCGAAGGTTG TAGTTTTTAAATGATGATTTTGATGAATGGGATATTACGGATGCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_56462; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_71539
| Blastp | NIPA-like protein from Xenopus with 26.63% of identity |
|---|---|
| Blastx | NIPA-like protein from Xenopus with 26.63% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (399009) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456438.1) |
| Pfam | C3HC zinc finger-like (PF07967.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |