| Id Trinity | FTRINITY_DN56008_c4_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_72478 |
| Sequence | TAACAATTGGTTTGTTTGGCCTTTGTATTGGGCTGCTCAAGGGACCATGTTTTGGGCTTTGTTTGTTCTTGGACATGATTGGTAATAAATAATAATTACT TTTTTGTTTTCTAATTGTTCTTGTTCATATGTAGTTGTAGCTATTGGCTATTTGGTAGTGTTGAATTTGTGTTTTTGTGTTTTTGTGTGTGTGTGTTTGA TTAATTTAATTGATGTTTTGGTTGTTTCAGTGGTCATGGAAGCTTCTCAAATGATCATAAGCTGAATAGTGTTGTTGGGCATTTGTTACATTCTTCAATT CTAGTTCCTTATCATGGATGGTATACTAATGTTTCTGAAGCAATAGCTTTTTCGCTGTTCGTCTATTTTATGAAGGTTCTGAATTGCAGTTCCGTTTGCG TTACGCATTGTGGTTGTTTGTAAAGACTACCAAATCCGCAATACTATGACTGCAATTTAGAATCTGATATATGCTTTCGCCTTTCATGCTTCTTTCTAGT TTTAAACCCATCTTTGTAATTGGCATTTTGCTGAACTATGCAGGAGAATCAGTCATAGGACTCATCACCAGAATCATGGTCATGTTGAAAATGATGAATC TTGGCAACCGTTAACTGAGAAAATGTTCAGGAGCTTGGACAATATGACACGTAACTTAAGATTTACGGCACCTTTTCCATTGCTTGCATATCCTGTGTAC CTATTTAGCAGGAGTCCAGGGAAGACTGGTTCTCACTTCCACCCGGACAGCGACTTGTTTGGTCCAAATGAAAGAAATGATATTATCACTTCTACACTCT GTTGGTCTGCTATGGTGGCAATTCTTGTAGGATTGAGTTTTGTAATGGGTGCAGGTCAAGTGTTTATGCTTTATGGTGTTCCATATTGGCTTTTTGTTAT GTGGTTGGATCTTGTGACTTATTTGCATCACCATGGCCATGAAGACAAGTTACCATGGTATCGCGGAAAGGAATGGAGCTACCTAAGGGGTGGTCTTACA ACAATTGATCGCGATTACGGATGGATTAATAACATTCACCATGACATTGGAACTCATGTTGTTCATCACCTTTTCCCTCAAATCCCACACTATCACTTAA CTGAAGCTACTGAAGCAGCAAAACCTGTGTTTGGAAAATACTACAGAGAACCAAAGAAATCTGGTCCTATTCCTTTTCACCTTGTTGGAGACTTTGTTAG AAGCTTGAAGAAAGATCATTATGTTAGTGACACTGGTGATATTGTGTTCTATGAAAGTGACCCTCAGCTTAGTGGCTCATCAAAATAAGATTAAATAAAG GGACTCAAATCATTGAATTTTTTGGCTTACTAAGTTACTGTCATATAGTAATAATTCTTGTACAATTTTGAAGAGTGAAGTATATCAAAAAATGGACTAT TATTGTTCATCAATGAAGTAATTCATCCGTTCTTATATAACCGTCATTTTAAGGTTTTGACACATATATTAAGAAAGTTAATTAATGTAGTAAAATTATT CATCAATTTCCTATAATACTCTTTATCTCTCATACTCATAAATTCCAATCATTTTGCACCATTATTCCTACTTGAGACTACAAATACCTCATTTACTCAA GTGTTTTTGTCTTTTTATTTTCTATTTTATGTTCAACGGTAATACTTTTATTCTATTTACTTCACTTAATATTGGAAATAATACTTCATTTAATATTTCA ATATTGAAAATACACAATTAATCAAAAAGTAATTGAAATATTACGATAATCAACAATATCTATTACGTTTAGTTTTGGATAACTATGCAGAGTGAGAAAA CTTTTAACTTAAGGGTATAATTGGGAAAATATATTAATATTCTCTTGAACTTTGAAAAGTGACAAATAAAAAATAACAAAATAATGATAATTATATATGA ACGAAGGGAGTAAGTAGGAGTGTAGGACAATCTTTTATATCAAGCAATACCAAGAAATACATAAATTTATTCATAGTACATATGTTGTTTCTCTATTTCT TCAATAAAAGGCTCTTGAATTTCCTTCAACATATGAATTTCCAATCAACTATGGTTGACCCTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_56550; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_72478
| Blastp | Omega-3 fatty acid desaturase, chloroplastic from Soja with 80.18% of identity |
|---|---|
| Blastx | Omega-3 fatty acid desaturase, chloroplastic from Sesamum with 79.76% of identity |
| Eggnog | linoleoyl-CoA desaturase activity(COG3239) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450336.1) |
| Pfam | Fatty acid desaturase (PF00487.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |