Id Trinity | FTRINITY_DN56009_c0_g1_i1 |
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Name Transcript | Ll_transcript_73483 |
Sequence | TTACAAAATACCCACATCAACAACCTGTTCCTCAGCCTCAGGAGGAAGAGGTTTCAAACTCAAAGGGTTCAGTGAAGAATAATGAAGCAATAGTGAGTAG TGAAAACGAAGAAGAAGAGAAAGAAGATTATGTACCAATGGAAGAAGAATCATTCAACCCTGCTACTGTTTTTACCATTAAGCTTAACCAACCAACTTCC AATTTGCTTCATAAGATGAGTGTTCCTGAACTTTGTCGCAATTTCAGTGCTGTTTCTTGGTGTGGAAAACTGAATGCTATAGCTTGTGCTTCTGAAACAT GCGCAAGAATCCCAAGTTCAACTACAAATCCGCCGTTTTGGATCCCTATACATATTGTGATCCCTGAAAGGCCAACTGAATGCGCATCATTCAATGTTAC AGCAGATTCTCCTCGCGATTCTGTCCAGTTTATTGAATGGTCCCCTGCCTGTGTTCCCCGTGCATTATTAATAGCAAATTTTCTTGGGAGGGTAACTATT TGGACTCAGCCATCTCCAGGGCCAACTCATCGTGTACTTGATACTAACTTCTGGCTGTGTGAGCATGAATGGCGGCAAGATATTGCAGTTGTTACAAAGT GGCTATCAGGGGTGTCTACATATAAGTGGCTTTCATCTGAATCGACTGCTCCTGCCAATTCGAAGTCAACATTCGAGAAGTTTCTTTCACAACAATCTCA AACATCAGCTAGATGGCCCAATTTTCTTTGCATCTGTTCTGTGTTCTCATCGGGCTCAGTTCAACTTCATTGGTCCCAATGGCCTCCTTCTCAGAATGCA ACCCCACCTAAATGGTTTTGCACTAGTAAAGGACTATTGGGTTGTGGACCGAGCGGCATTATGACTGCTGATGCTATCATTACAGACAGTGGTGCCATGC ATGTGGCAGGTGTGCCACTTGCTAATCCATCCACCATTGTTGTTTGGGAGGTTATTCCAGGGCCTAGAAATGGTTTCCATGTAACTCCAAAGACAAGTAT CAATAATGGTTTCCCGCCTCTTAACTCGCCTAACTGGACTGGTTTTGCACCTTTAGCTGCATATTTATTTAGTTGGCAAGATTATCTATTATCTGAAGAA AACCAAGGAATAAAACAGACAGACCAAAACCTCGGTGATGACTCTATCACACTTCACAGTTCACCGATTTCAAATTTTTCAGCATATGTGAGCCCTGATA CTGCAGCTCAATCTGTAGCAACCACCACATGGGGTTCTGCTGTGACAGCAGTAGCCTTTGATCCAATTCATGGCGGTTCTGTCATAGCAGTTGTGATAGT TGAAGGACAGTATATGTCCCCTTATGATCCGGATGAAGGCCCATCAATTACACGGTGGAGAGTGCAACGCTGGGAATCATCTTTACAGCATGTTGTTATC CATCCGATATTTGGGGACCCTACTTCGAGTATGAATGGACAGCCTCCTACCCAAACTGTTTGGCATTCCAAAGTGGACCTGACAATTGCACCATGTGATT TGAAGATCCATCAAGCGCCTGCAGTTGGAATGAACAATGATGTGCAAAAGGCATTAGAGTCTGGTTTTGATAAATCGAAAAGGGTCGATTTTGATCCTTT TGATCTTCCAAGTGATGTTAAGACACTTGCAAGAGTTGTTTACTCTGCTCATGGAGGTGAAATTGCTGTTTCTTTTCTTCAGGGTGGAGTCCACATATTT TCTGGTCCAAGTTTTGCACCTGTAGACAACTATAAGATTAATGTTGGATCTGCAATTGCCGCTCCTGCATTTTCTTCAACAAGCTGCTGTTCAGCTTGTG TTTGGCATGACACAGGCAAGGATCAGACAATATTGGAAATATTCCGGGTTCTTCCTCCGGCCATTTCAGCAAATCAAGTAAAGGCCAGCTTATCAACCTG GGAGCGTGCAATTGCTGAAAGGTTTTGGTGGAGCCTTTTGGTTGGAGTTGATTGGTGGGATGCTGTGGGCTGCACCCAGAGTGCTGCTGAGGATGGTATT GTTTCACTTAACAGCGTTATTGCAGTTTTGGATGCGGATTTCCATTCTCTTCCTAGCTCTCAGCACAGGCTACAGTATGGTCCTAGTTTAGACAGGATAA AGTGTAGGTTGCTGGAAGGATCAAATGCCCAAGAGGTCAGGGCAATGGTTCTTGATATGCAAGCTAGGTTGTTGTTGGATATGCTTGGGAAAGGAATTGA GTCTGCTTTAATAAATCCTTCAGCTTTAGTGCCTGAGCCTTGGCAAGCATCCGCTGAGGCATTAAACAGCATTGACTCTGAATCGATGGCTATTGAACCT GCATTAGTTCCTACTATTCAGGCTTATGTTGATTCAGTTCTTGATCTGGCTTCACATTTTATTACACGCT BLAST |
Tissue | flowers |
Gene name | LI_gene_56557; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_73483
Blastp | Mediator of RNA polymerase II transcription subunit 16 from Arabidopsis with 72.47% of identity |
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Blastx | Mediator of RNA polymerase II transcription subunit 16 from Arabidopsis with 75.64% of identity |
Eggnog | NA(ENOG410XS10) |
Kegg | Link to kegg annotations (AT4G04920) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425278.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |