Ll_transcript_71648

Id TrinityFTRINITY_DN56011_c0_g1_i14
Name TranscriptLl_transcript_71648
SequenceCTTAAAAGTTAAAATAACAGTGTGCTGCATAACACATAAGATAAGGATTTAAAGCTTCGCCATTCATTTCCCTCGCTCTATCATCATTACCCATTTCATG TTTTCCAATAAAGACTTCATTTTTATTTACAAATTCCCTTTACACTTCTAGGACCATAGTGTTTCTTTTAATTCTTTTGGCCTTTTGAAGCTTCTGAGGT ACACATTCTGCTTCAAAACCATCATGACTTTGTTTTACTGTGTTACATGTTCCCATTTTCTGTTAAAGTTTCTTAGTTGAACTTTGGACTCACTTCTTAC TGTTATAAAGTATGAGTGTGGTATTTTCATGAAGTGAGCTTAAAACCTTTTTTTTCGGGTTCAATTTGTTAGCTTAATTTGCATTTCAGACCTTATTTTA TGTTTTGTGAGGTGGGTTTTTAAAATTATGTTTGCTTTTTGTAATTTTAGCATGTGGTTCACAATTTCATGTTGTGTTACATTCTGATGATAATGCCAAT GTTCTTTTTTAATTTTGAAAATTACATTATTGACACAAAGGAGATAATTGAACTTTGTTAAATTGCCAAACCCAAATGTTGAAATTCAACAACAATTCAA AGTTGTTCAGATTTTGAGCAAGAGGAAACAACTATGAATGGTGCTTTGAACATTTCTACACACCATACATGAATAGTTGAATGATATGAAAATAACCAAT TGTTTTGTAGGAGTGAATAAACCATTTTACAGCAAACTATATCATCATGGAGCATGTTTATGTAATATTATTCGTCTATTTGTAAAATTTTGATTCCTGA ACCAATTATGTGATTTGTATCTGAGATTGCCACTATAACTTGTTACTTAAGGCTATACTGACTTATAATGTCCTTCTTATGTTCTGTGAAAATAGCACCA GATGAGCCGATTCTGAGATATAATCGAGTTTTAGAATTCAAGTCAACATGAACCCTGTAATTCAATGCTTTGTTAGCAATGTTTCACCTATTGCTGGAAT TGCTTTTCCAACAAGGATAGATAATTCTTTAACAACACTCAGTCTGTCAAGGAGTGCAGTAAAATCCAGATCGTCTACTCGGAGATGTCTTTTACCTTCG TTTGTTGCGGGTGGAGTGTTTCAACAGAACAAAAGGAGACTCTCATTTTGTAGAAAATCTAGAGCCATATCAGCCACAGGAACAGAGATAGCAGTAGAGG AACCAGGTTCAGTTGTTGTAGGTGATATTTCTGGTGAAACTCCTTCAGATGAAATTGGAATAAGTGATGATTCATCTCCTAAGTCTGATGTGAAACCTGC ACTAGCTAAAGCCAATAGTTTAAGACCTGCAAGCGCAAGAAGAAGTGACATGCCTCATGTGGAGACTGAGGATCTGATTCCCGGGACGACTTTTACTGGC AAAGTTAAATCTGTCCAACCATTTGGCGCCTTCATTGATTTTGGAGCATTCACAGATGGACTTGTTCATGTTTCAATGTTGAGTGATGACTACGTTAAGG ATGTTTCAAGTGTTGTTTCTGTTGGACAAGAAGTGAAAGTGAAGCTGATTGAAGTGAACACTGAAACTCGGCGCATTTCACTCTCCATGCGTGAAAATGC AGACACTGGTAAGCAACGTAAAGAGGCACCCATCAATGCAGAGAAAGGTGGACCTGGGAAGAGGAACACTTCAAAACCAGGTCCAAGGAGAGATGGTGGT AGGAAAAGCTCAAAGTTTGTCATAGGGCAGGAACTGCAGGGTACAGTGAAGAATATGACTAGGAGTGGTGCTTTTATTTCTCTTCCTGATGGGGAGGAAG GATTTCTACCAATATCCGAGGAACCTGATGATGGATTTGGGAATGTTATGGGCAACACTTCCCTAGAGGTTGGTCAAGAAGTCAGTGTGCGCGTTTTGCG TATCTCAAGAGGACAAGCAACGTTGACTATGAAGAAAGCGGAAGATGTTCCAAAAGTGGACTCAGTCATTGGCCAAGGCGTTGTCCATGTTGCAACAAAC CCTTTTTTATTGGCTTTTCGTAAGAATAAGGATATTGCTGAGTTTTTGGATGAGAGGGACAGAATTCAGAGAACTGTTGAAAAATCTTCAACCACAGAAA CTTTAGAAGAAACCAAGGGAACTGTCAAGGAAGATGAAACATTATTGAATGTTCCTGATGCGAAGGATGGACCAGAAAGCACCGAGACTTTGATAGAGGA TGCTCCTTCTTCAGTAAAACATACTGATGCAGATGATCTTTCTGGAGAAGATGCGGGACCCGGTGCATTTGATGTCTCAACAACTATCGTCGATGGTGAA AGAGATTCAATCGGCAATGTCTCTAGCCCAACAGAAGCTATAGACGATGCTGCTGAGAAGGAAACAAAAGAGGTGGCTTCTGGAAGTTTGGCCCCTGAAG GGGATCTACCTACTGTGAATCCAATTATTGAGGAAGCCCCTCAGACAGATGTAACAACAAGCACTTTAGAAACTGGGTCACCTCTTGGAATAGCTAATGA AAATGCAATCAAAATTGGAGGTGATCCTATCGTCGCAGAACACGAAAAACAATCACAGACATCTAATGCAAAGGAGGAATTTGCTGCTGTAGCATTAACA AACGTTGATGTGGTTGAACCTAGCCCTGATAAAATTGATACTATTATAGAGTCAGATATCACATCAAGTGTACCAGCTCCCCAAGAAACTGCAGATGGGA CGGAAGAAAATGATCAAGTTCCCCCTCCTGAAACTCTTGCTACTGAAGTCATAGAAGGTTCCATTGAAGACTCTAAAGAAGAAGAGAAAAATCAAACACT AGCAGCAGAGAATGAATATTTGGCTACCTCAGAAGTTGAAGATAAAGTGGTTGCAATTGCATCCGAGGATAATAGCAGCTTATCCATTTCTAATGGGCAA AACGACATTACCGCTTCAGATGAAGGCTCGAGTAAAGCAACTATTTCCCCGGCACTTGTGAAGCATCTTCAGGAAGAAACAGGAGCTGGAATGATGGACT GCAAAAAAGCTCTGACAGAGACTGATGGGGACATTGTTAAAGCACAAGAGTTCCTTAGGAAAAAAGGTCTATCAAGTGCAGAAAAGAAAGCAAGCAGAGT AACTGCTGAAGGAAGAATAGGTTCTTACATCCATGACAGCAGAATTGGTGTTTTGGTAGAAGTAAACTGCGAGACAGATTTTGTCTCCCGGGGTGAAATT TTTAAAGAGATGGTTGACGATATAGCCATGCAAGTGGCTGCATGCCCTCAAGTGGAGTATCTTGTTACCGAAGATGTGCCTGAGGAAATCATAAATAAAG AAAAAGAGATAGAAATGCAAAAAGAAGATCTTTTATCAAAACCGGAACAGTTTAGATCGAAGATTGTTGAAGGGAGGATAAGAAAAAGACTTGAGGAGCT GGCATTGCTTGAACAACCCTACATTAAGAATGATAAAGTGGCAGTAAAGGACTTTGTTAAGCAGACTGTTGCAACTATCGGAGAAAATATTAAAGTTAAG AGGTTTGTGCGTTTCAACCTTGGGGAGGGTTTGGAGAAGAAAAGCCAGGATTTTGCTGCTGAAGTGGCTGCACAAACTGCTGCTAAGCCATTACCCACAC CAGTGGTAGAGCAACCTGCTGTTGCAGCACCCACGGAGACCGAGCAAAAGAAAGCAACAGTAACTGTCTCTGCCTCATTGGTTAAACAACTAAGGGAAGA AACCGGAGCAGGGATGATGGACTGCAAGAAAGCTCTTGCTGAAACTGGAGGCGATCTTGAAAAGGCGCAAGAGTACCTCAGAAAGAAGGGTCTCTCATCT GCTGACAAGAAATCCAGTAGGCTAGCAGCTGAAGGCAGAATCGGTTCTTACATTCACGATTCCCGCATCGGCGTTCTAATTGAAGTGAACTGTGAAACTG ACTTTGTTGGTAGGAGTGAGAAATTCAAAGAGTTGGTTGATGATCTTGCGATGCAAATCGTCGCGTGTCCACAGGTGCATTATGTATCCATTGAAGATAT TCCAGAGACCATCAGGAACAAGGAAAAGGAACTTGAAATGCAAAGAGAGGACCTTGCTTCAAAACCTGAGAACATAAGAGAAAAAATTGTTGAGGGAAGA GTATCAAAGAGGCTCGGGGAGCTAGCACTTCTAGAGCAACCTTTTATTAAGGATGATAGTCTATTAGTGAAGGACCTGGTGAAGCAAAGTGTCGCTGCTA TCGGAGAGAACATAAAAGTAAGGCGTTTCGTAAAGTTCACTCTCGGAGAGACTGCTGAGAGTGCAACAGAAGTAGCAGCAGCATAAGTTTAAAAGTGTCA TAACAGCATGAATGGTAACAAGGGAATCCTTGTGTATGTTACAACAGAGTATGAAGAAGTACGGAAAGGTTCAGACTAGTTTTGGAAAACAGTATGATAC TTCATAATAACCAAAGATGCAGTCGGTAAGAACACATTTTACTAATCTGTATCCACATTGAGATACACGAGAACAATAGTTTTTCGATAAATTAGTTGAT GCATTTTTTGAATTACCAGTTTCATTAAGTTTTGTGAATCACCAGTTTCATTAATTCTTGAACCATTATTTCTGATTTAGATTATCATTCTGTATTATAA CAGTTGATAGGATAAGCTTCAATCTTTGCATATAGTAAGCAGCTATAGTTAGTGTAATTCATTGGTGACTTTATGCTATTCTTCTTGAAAATTCTGAAGA TTTAAGTATCGTATCCATTTTTATAAGCATGTATAAAAAATCAGGCCAAAATTCAACCTCTACCTTCAAAAATGAGTATGTTTTCTTAGCAAGAACAATA TTCACTAATAGCTCTTCTAAATTATATAGGCC BLAST
Tissueflowers
Gene nameLI_gene_56569; 
Additional informationdetails; 

Expression of Ll_transcript_71648

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_71648
BlastpElongation factor Ts from Cyanothece with 61.54% of identity
BlastxElongation factor Ts from Cyanothece with 65.64% of identity
EggnogAssociates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity)(COG0264)
KeggLink to kegg annotations (PCC7424_1152)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019457841.1)
PfamS1 RNA binding domain (PF00575.22)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;