| Id Trinity | FTRINITY_DN56021_c4_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_72232 |
| Sequence | CCCGATTATGTCGTGGCTAATTCTTATTCACTCTCAGATTTTTAGCTTCGGATAGTGTTACTGTGACAAAAGTTGAAGTCTTCAATTACCCATTTGTTGA AGAAGAAGAATAATCAAAGACCCTCTTCAAAGTTTGCATCTTTTTTGAATTATTATTATTATTGAACCATAACAAAAGAAGCTTCCATTGTTACAATGTC TCAAATCTTGCAACTTTCATTCTCTTCAACTTCAACTGGTCTAAGTTCTTCAGTAAAAATGAAGGGAACAGCAAAAAGGCCTTTCTTCTTTCAAATTCTA TGCTCTTCTTCTAAGCATTCAAGTTTCAAAGATGAAGATGATGATAATGTTAATAAAGGAGATCGAGGCTTATCCCGGGTGATATTGGTGGAGAGATATA GCAATGATATGTAGTAGATGATGATTCACAGCTTCAAACCTTTCTTTTTGAAGAGGATAAGTCTACAACAAACATGCTCCAGGATTCGCAAAGACTATCC TGGCTACCGGAGATAATCAAAGATTTTATTCTACCAGCAGGCTTTCCTGGATCAGTTTCAGATGATTACTTGAACTACATGTTATTACAGTTCCCTACCA ACGTGACCGGATGGATTTGTCACACCCTCGTCACTTCAAGTCTCCTAAAGGCTGTTGGTGTTGGCTCTTTCTCAGGAAGCACAGCAGCTGCTTCGGCTGC TGCCATAAGGTGTCTCCGTTTTGACTTTTGAGCATACATTTTTCTATATAGAACATTTATATGCGTCTAATTATCTTACTATATGCAGCTATTTATTTGT TATCTAGACTTTTATGTAGTTGATTGCATGTTTTATGCTTTCATCTTTAGATGGGTCTCAAAGGATGGCATTGGAGCAGTGGGACGCTTATTCATCGGTC TGTCAATAATTAAAAAAGATAAACGAGGAAAACGATTATGTGCTGAAGATCCGAGTTATTAATTGATCTTTAATTAAGTGTTCCTACATTTTCAGGTGGG CGGTTTGGGAATCTTTTTGATGATGATCCAAAGCAATGGAGAATGTATGCAGACTTTATTGGCAGTGCTGGAAGCATTTTTGACCTGACGACACAATTAT ACCCGGACTATTTCCTTCCTTTGGCATCTCTTGGAAATCTTACTAAGGCTATAGCAAGAGGACTAAAAGATCCTTCCTTTCGTGTGATTCAAAACCACTT TGCGCTTTCAGGAAATGTAGGAGATGTAGCAGCAAAGGAAGAAGTTTGGGAAGTGGTTGCTCAACTGGCCGGCCTTGGTTTGGGCATATTGATACTGGAT ACACCTGGCCTTGTAAAATCATACCCTGTGCTTCTATCGACTTGGATGAGTATGCGACTTCTGCACATTTGGTTACGCTATGAATCACTTTCAGTCCTCC AGTTCAACACTATAAATCTTAAGCGTGCTCGCATTCTCGTAAAATCACATGTGTTGCACTCTACTGTTCCAGGATGCAAGGATTGCAACAGGGAAGAAAA TATACTAACCTGGCCACAGTTCATGAAACCGGAAATTATTTTTGGCTTGCCTTTGGAGAAGATGAATATAGAGAGATCTCATTTTATGGTGAAGGCATTT CTGAAATTATATGCACATGAAAAATACATTCTTATGGTGAACCAACAGCAACAAGATTTGAGATTTCATGTTTCTTTCAAGGTTGGAGCAACAAGTGTGT CAGTACTGAGAAGTGTGTGGCAAAGTTTCTGGCTAAGTGAAAACTGGAACAGAGAAGGTAATGTTTGTGATCAACTTGGCAACAGCCTAATGGAATTGGA AAATAAGTTTGAGGATTTCATTCAAAAGTTGAAAGTTGCTGAATGGGATACTCAGAAATTAAATTTGAAGGTTCCTAAAGAAATCTTAATTGATGATATC AATCCTCTCTAACTCCTAACATGTTGGAGCTGAGAATGTTTCACATTTTCATCATTGATATGATCATGCTGTCTTTCAAGACTTGCAAGCATTTCGAACA AGCGGGTAACCTCTACGACTCGATCTCTACCTCCCGAACTCCCTTTGCCACTTCCTGTAATTAGTCGAGAAAATAAAATTTACAACTAAATATTCGTTGG ATTTATTTTCTTGACCAATTAGAGCTCGTGGCACATGGAGTCGGCACAAATGAGTAGTATATGCGATCTTATCCCTAGAGCAAGATATGTTTTTCTTGAC ATGGAGATATTCAACATGTTGGCCAATTGGCTTTACTCTTTAGCTCATTGAATACCATAGTCTTATTAAGAAGGTTCCTGGTGTAAAGAATCTGTTCTCA ATTTTGTTTGAAACATTTAATGTTTGTAACTATTTTGGAGAGAAACTTCATGCTTGCTGTTCAGGACTATGTATACTATACCGTGGACGTCTACCTTGCG ATTCTGGCTTCATGCAGGTGAGTTGCAGCCTACAATCCGAACTTAGGATGAGTTTTTGGAGTTAGTTCACCCCTGTGGGATCGCGGTCCTAAACAAGATT GATACCGGATACTCAAATTGATTACCCTCCTAAAAGGATGGTTTGGAAAATAAAGAGAATTTTAACGAAGAGGAACAACAACTACAGAAGAGATGCACAA GTCTTTCAAAGATTCCCTCAAAGCTCTTGAAGCTGATATACACTTTGCCAATACACTAGCTTCGAATTATGCGAGCGACCGTGACGGCACCTGCCTCCAA ATGAGATTATCCTACAGCCCAGCTGCTCAGTTTTTCCTATTTTTGGTTGAGTGGACTGATTGCCACCTTGCTGGGTCCTTAGGACTGATTAGAATTCATA TATACAAGGCATATAAGAATGAGAAATCAACCATGTCTATATACAGAAGGAAAGCTAGTCTGAAGGAATTCTATGGTGTAGTCTTTCCTTCTTTATTGCA ACTCCAAAGAGGAATAACTGATGTTGATGACATGAAACAAAGACATATATGTGCTACCAAGTACAAGGCTAAAGATGTGATGAACAAAGGAAAAATCTCT GAAATTGATGCTGAGAGAGAAGAAGAATGTGATATTTGCATGGAGATGAACACCAAGGTTGTTTTGCCAAATTGCAATCATTCAATGTGTATCAAATGCT ACAATGACTGGCATGCAAGATCACAATCATGCCCTTTCTGCCGTGATAGTCTTAAAAGAGTGAATTCTAGGGACCTTTGGATCTACATGAGCAACAAAGA CATAGTTGATTTGACTTCAATCAATAAGGAGAATTTGAAGAGACTATTTATGTACATAGAAAAGTTACCTCTCATTGTGGCTCACCCTATATTCATCTCA TACCATCAACACTGGTGAATCATTCTCGAAGTTATCTCATAAATGTAAATTGCCGGATTTTTTTTACAACAATCAAGTCTTATTCTCGTTTTGTCGAATG TTAGGATTTTGTTTAATTTTAGATATATTTGTTACCTTTTATCGTAGGATAATGTTATGACCATTTCATTGGAATTAAATTAATCATCATCTCACTAGTT TTTGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_56652; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_72232
| Blastp | Protein root UVB sensitive 5 from Arabidopsis with 64.36% of identity |
|---|---|
| Blastx | Protein root UVB sensitive 5 from Arabidopsis with 65.78% of identity |
| Eggnog | Chromosome 16 open reading frame 58(ENOG410XU74) |
| Kegg | Link to kegg annotations (AT5G01510) |
| CantataDB | Link to cantataDB annotations (CNT0001676) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003530281.2) |
| Pfam | Vitamin B6 photo-protection and homoeostasis (PF04884.13) |
| Rfam | - |
| GO | - |