| Id Trinity | FTRINITY_DN56062_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_73026 |
| Sequence | GGCAGAGGACGGGGAAGAGCTGGCTCTGGCCGTGGAGCAAGCAGGACCTTTAATGGTGGAAGAGTGTCCGGTGCTGCTAATGGTGGAAGAGTGTCTGCTG CTGCTAATGGTGGAAGAGTGTCTGGTGCTGCTCGCCGGGGTCCTCTTGTTCTTAATGCTCGGCCATCATCTTATGCTATTGCCAAGGCAAGCTCAAAAAC ATGGATGCTTATATATGTGCTTGAGATTCTGATTTTCTAACCATACCTAATCATGAGAGGATTCAGCAATTTAGAAACTCAAATCCAAGAAGACTCCTAG TTTAATATTTGTTCCACAGTGAAGCTCATGCTCGATCATTTTGCATCCGTAGTTCCATAATGTCACAATTAATATACTTCTAAGCATTGTTTGCTTCTGT TTTGGGGGCTTTGCTACAGATCTCTGATATTTGCAGGAATTCTTTGCTGATCCATAGCATATTATATGAAGAAGCTTCATTAGGTGAATTTGAAAATAGA GATCTTACAAGTAGCACAAAAATCATTTTAACTATAAATGGGGTTTAATCCTCTAAACCATGCTAATCCATTTCATTTAGATGAGATGACATCAAAAGTT TGGCTGGTTTGTGTGGACCGGTGTTTTACTCGATCCATTTGCTAAGTTGGGTTCTACCGTGCAAGGAATCAGTTTACTTCCCTATTTCATCATATTTTGC AAAGGAGCTTTTCACATAACATCAGCACTGGAGCTCCCATCTACCACCTTTCACCTAGATTAGTGATGTTTGAGTAATAGGCTTTCCTTAATATATTATC TTGGCCAGAGCAAAGAACTACTTCATTGACAGTGCTTTTTGTTTTTTGTTTTCTTATGGGGATTTTCCTTCTCTAACTAAACTTGAAGAATGATGAATGT ATTTTTCTGGCCATATCTGACATGTTCTGTTTGCCACTCTGGAATGTGTCCTGGTTGCTTCGACCAGTCTATTCGTGGAACAAGGCCTTTTCCATGGCAG CGTACAGATTTGTTTGAAGATAGCCTAAGAGCTGCAGGGATATCAGGAATAGATGTAGGCACGAAGTTGTATATTTCCAATTTGGACCATGGAGTAACGA ATGGAGACATAAGGGAACTTTTCTCTGAGCTTGGAGACTTGAAGCGCTATGCTGTTCATTATGATAACAATGGACGTCCAAGTGGTTCAGCTGAAGTTGT CTATACTAGAAGAAGTGATGCATTTGCTGCTCTTAAACGATATAATAATGTACTTTTGGATGGAAAGCCCATGAAGATTGAGATTGTTGGTGCTAATGCG GAATTACCTATGACTGCTCGTGTGAATGTCACTGGGGTAACCGGGAGGAGGAAGAGGACAGTTGTGATGACGCCTAGAGGTGTTCAAGCTGTTGGTCCAG CTGTAGGTCCAGCTGTGCCTAATCGTGGTGCTGGCTGGGGACGTCGTGGTGGCCAAAAGAATGGGAGTGGTCGTGGCCGGGGTGGAGTCCGTGGACGTGG CCGGGGTGGAGGCCGAGGTGGTCGTGGGAAAAATGAGGCCGTTGAGAAGTCAGCTGAACAACTTGACAAGGAACTGGAAACGTATCATGCTGAGGCCATG AACATCTCATGATTTCTGAAGCTGCGAGGTTAATATTTTATGCGAGCCAAAAGATGGTATTGGCTCTGTTGTACAAAAACAGCTGTGTCTCCTTGGTCTT TATTTGAATTTTCTACTACATTTTACTTTTAATTGCTCTTATTTGGAGCTGAATGATTAGGTGGGTGACTTTTGTAAGTTTTCAGGTTATGTACTATTCG ATTTGCCTATTATTTTGAAGTTGTGTATTTAGTCTTATTGGAAGATGTGTAAGTGAGTCACTTCTCTATAAAAATGAACCTTTTATGCACCTAGGTAGTA GGAATGCGTTAGGTATTACCATTCTCTAAATATTATTTATCAAATTGGCCTGGTGACAAGTGATGTGAAGCTAGAAAGTTTGATTTTTTGGATTGACACT TGTTGGATGTGATGATACTCTTGGTAACACTAAAAAAATTCTCTAAATATTAATTAGGTTAGGATGAAGATAAATTATTAGTTCTTTATGGATACTTATC CTTTAACCTAGCTTCTAGCAATTTCTAATAATTATTCAATGGTTAAGCATTATATCACTAGTTTTGAGCCAAGCTTCGCCTTGAAGAACTGTAGGGAGCA CATCTACTGTCGCACTTTTTGTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_56990; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_73026
| Blastp | THO complex subunit 4D from Arabidopsis with 54.01% of identity |
|---|---|
| Blastx | THO complex subunit 4C from Arabidopsis with 62.86% of identity |
| Eggnog | Polymerase (DNA-directed), delta interacting protein 3(ENOG4111JAW) |
| Kegg | Link to kegg annotations (AT5G37720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439484.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |