Id Trinity | FTRINITY_DN56062_c2_g2_i5 |
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Name Transcript | Ll_transcript_73036 |
Sequence | CTCGTTTTTATTGTGGAAACCCTAAAACCCCAAATTGCGCTGATTGATCTTTCGTCTCTATTTCCTTTCAAACCCTAATTCACTGCTCCTTCCTATTCAA GCTTTTGCCCCCGAAATCACAAACACTTTCCCTTCTCTTGAACGCTTCTCCGCTTGATTCGTACTCATCCTTTGTTCTGTTCATCATCACCAGGGCTACA TTATTAACGTTTCTTGGAGAATTCTCTGTTAAGTTGCATGTGCAATGGCTTCTTTGGATATGTCACTTGATGATAGAATTAAGAACAGGAGTAGCAGAGG GAGAGGCAGAGGACGTGGAAGAGCTGGCTCTGGCCGTGGACCAAGCAGGACCTTCAATGGTGGAAGAGTGTCTGGTGCTGCTAATGGTCGAAGAACAACT GGTGCTGCTCGTAGAGGTCCTCTCGTGCTTAATGCTCGGCCATCATCTTATGCTATTGCCAAGGCAAGCTCAAAATGCGGATGCTTATACACATGCTTAA GAGTCTGATTTTCTAAACATACCAAATCATGAGAGGATTCACATTTTAGAAACTCGAAAGCAAGATGGACTTCTAGTTTAGTATTTGTTTCCATGGAGAA GCTCATGTTCGACCAATTTGCATCCATAGTCCCATAATGTCACATTAATATTCACATAAGCATTGTTTGCTTTTTTGGGGGGCTTTGCTACAGATCTCTG ATTTGTGCAGGAGTTCTTTGCTGATTCCTAGTACATTGTGTGAAGGAGCTTCATTATGTGAATTTCATCATAATAGAGATCATAAAATTAGCACAAAAAT CATTTAACTATAAGTGGGGTTTAATCCTTCGCCATGCTGTTCCTTTTCATTTAGATGAGTTGACATCAAATGTTTAGCTGGTTTGTCTGGACTGGCGTTT TATTGGATCCTCTTGCTAAGTTGGGATCTAAGGTGCAAGGAATCAGTTTACACAACTATTTCATCATATTTTGCAAAGGAGCTTTTCACTTAACATCAGA ACTGGAGCTCTCACTTGTATTATAGCACTGGTTTATATTCAGTGGTTGAATTCTTACTCCCATTTACCTCCTTTCACCTAGATTAGTGATGTTTGAGTAA TAGGTTTTCTTGAGTATATTATCTTGACCAGAACTACCCCATTACAGCATGTTTTGTTTTTTTGTTTTCTTCTCGGAAATTAACTCTACTAAAACATGAA GAATGATGAATGCCGTTTTCTGTTCATAATCTGACATGTTCTGTTTGCCACTCTGGGATATGTTCTGTTTGCTTTGCCCAGTCTATTCGTGGAACCAGGC CTTTTCCGTGGCAGCGTACTGATTTGTTTGAAGATAGCCTAAGAGCTGTAGGGATACCTGGTATTGAAGTCGGCACCAAGTTGTATGTTTCCAACTTGGA TCATGGAGTAACCAATGAAGACATAAGGGAACTTTTCTCTGAGCTTGGAGATTTGAAGCGGTATGCTGTTCATTATGACAAAAATGGGCGTCCAAGTGGC TCAGCTGAAGTTGTCTATACTAGAAGAAGTGATGCATTTGCTGCCCTTAAAAGATATAATAATGTACTTTTGGATGGTAAACCCATGAAGATTGAGAATG TTGGTGCTGATGCAGAGTTACCTATAACTGCTCGTGTGAATGTCACTGGGGTAACCGGAAGGAGGAAAAGGACAGTTGTAATGGCGCCTAGAAGTGGTGG AGCTGTAGGTCCTGCTGCTGTGCCAAATCGTGGTCTTGGTTGGGGACGTCGTGGTGGCCCCAAGGTTGGGAGTGGTGGCCCCAGGAATTGGAGTGGAAGT GGCCGTGGCAGTGGTGGAGGCCGTGGACGTGGCAGGGGTGGTGGCCGAGGTCGTGGGAAAAAGGATGGCGGTGAGAAGTCCGCTGAGCAACTTGACAAGG AACTGGAAACATATCATGCCGAGGCCATGAACATCTCATGATTTTGGAATCAGTGAGATTATTTTTATTTAGCCAAAAGTTTGTATTGACTCGTGTACAA AAACCGCTGTCTCTGGTGTTAGTTTGAATTTTCTACTGCATTCTACTTGAAATGCTCCTATTAGGGGCTGAATGATTTATTAGCTGGTTTACTTAAAATT TTCAGCGTATAAACAGTTAGCTTTGCCTATTATTTGTTTTTTTTTATGTAAATTGCAATCATCGTGCTGATCACCGGTGTCCTACTTTTAAGCACTCAGC CAGCCTTCAGTGTTGTTTCTGATGTTTTTTATTGCTGTTATGTGTTATCTGATATACAACCCTTGAAAACTTACATTTTTAGTCATGCTAGTTATTTATT GGAGAACTAATCAAGTAATTAGGAAGGGCTAAGTTTTTATGTGCAAGTCTTGTATCTTTTATTGTTATATTGGAAACTGAAGTTACATCTCACTTATAAG GTTATAGGAGGGTTTTTGTATTAGGTTTAATCTGTCTAACGGTTTAAACTGTATGATTGGATTGGCA BLAST |
Tissue | flowers |
Gene name | LI_gene_56990; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_73036
Blastp | THO complex subunit 4D from Arabidopsis with 51.88% of identity |
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Blastx | THO complex subunit 4C from Arabidopsis with 62.24% of identity |
Eggnog | Polymerase (DNA-directed), delta interacting protein 3(ENOG4111JAW) |
Kegg | Link to kegg annotations (AT5G37720) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419488.1) |
Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |