Id Trinity | FTRINITY_DN56064_c0_g1_i3 |
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Name Transcript | Ll_transcript_71171 |
Sequence | CCCACAGAACCTCAAGCCGACAAAAAACTGATGCAGTCCCACAAGTCTGTACATGAAATCATGAATATAAACACCTAGATTAATTTACAACCCTACCCCT CAGTTGTGGCATTCAAATTTAAACCCTTAAAAAAAGACGCAAGCCGAGGTACATAACATTGAACCTCATAACTGGTACTTTGGTGCTGCAACAACAAAAA CAATGGCTCAGTTGAAGACATTTCCTTCTTCATATTCTTACCCTGCAACTTCTCCTTCCCTACACAGAACAGAACAGGTTCTGCATCACCAGATCTGGAA GGAAAATCCATCATCATTCAAAAATTTGGGGACAAGAACAACTAATGGTGCTGGTAAATTTCAAGTTATAAGAGCAGTGGTAAGCAGTGATACAGAAACA GAAATTTCTGAATCCAAAAAGGTTAGCGGGCTACGTGGAAAATTAAATAAGGTTGTCTTGGCTTACAGTGGTGGCCTAGACACATCAGTCATTGTCCCAT GGCTGAGAGAGAATTATGGCTGTGACGTTGTTTGCTTCACAGCTGATGTTGGCCAAGGTATAAAAGAACTGGATGGTTTAGAAGCCAAAGCCAAAGCTAG TGGGGCCTCTCAGTTAGTGGTAAAGGACTTGAGGGAGGAATTTGTTCGTGATTATATATTCCCTTGCCTGCGTGCTGGTGCAGTTTATGAAAGGAAGTAT TTGCTTGGCACTTCAATGGCCCGGCCTGTTATTGCAAAGGCCATGGTTGATGTTGCCAAAGAAGTTGGAGCTGATGCTGTTTCCCATGGGTGTACAGGGA AAGGAAATGATCAGGTTCGATTTGAGCTCACTTTCTTTGCACTAAACCCCAAGCTTAATGTCGTGGCTCCATGGAGAGAGTGGGATATTACTGGGAGAGA AGATGCTATTGAGTATGCTAAAAAGCATAATGTACCTGTTCCTGTAACAAAGAAATCCATATATAGCAGAGACAGGAACCTCTGGCACCTTAGTCATGAG GGTGATATTTTGGAAGACCCAGCTAATGAGCCTAAAAAGGATATGTACATGATATCCGTAGACCCAGAGGATGCTCCAAATCAAGCAGAGTAAGATTCCT TCTTAAGTTGTGATTTGACTCTATTTACAGCCTACAAGTTTCTGTTGTCTTTTTAAAAATGTTGTACCTTGCATTTAAAAGCATGCATTATGAGTTGCAA ATATGTGGAAATTGGGATAGAATCAGGGCTTCCTGTTTCAGTTGATGGGAAGAGACGTTCGCCAGCATCTTTACTTGCCGAGCTCAATGAAGTTGGTGGA AGGCATGGAATTGGCCGAATTGACATGGTTGAGAGTAGGCTTGTAGGTATGAAGAGTCGTGGAGTTTATGAAACTCCTGGTGGGACCACCCTATTTACTG CAGTGTGCGAGTTGGAATCTTTGACACTTGATCGAGAAGTGATTCAAGTCAAAGATTCATTAGCCCTTAAATATGCAGAGTTGGTTTATGCTGACAAATG GTTTGATCCACTCCGTGAATCCGGGGATGCGTTTATGCAGAAGATCACAGAGACCACCACTGGTTCTGTGACTTTGAAGTTGTACAAAGATTTTGTTACT GTAACTGGTCGGAAGAGCCCCTTTAGCCTGTATAGACAAGTCATTTCATCATTTGAGAGTGGACAGATATATGACCAAGATGATGCTGCTTAGTTTATCC GGCTTTATGGTCTTCCGATGAGGGTCTGAGCAATGCTTGAGCAGGGTATCTAAGCGTTGATTTCATTTAAACATATACTTGATTGATAAAAAGGGATTGC TTTGATGCACTTGATTCAGTGACATTGACTTGTTTTATAAAAGGAATTGATGAATTAAAAGCGGTGAAGTAATTTTAAAAAATATGTTGTCAAGTTATGC CAAGAATTTAATTAATGTATTGTATTTTCAATACCAAATATTGTGCAAAGAATTTAATCAATGTATTGTACTTTGAATACCAAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_57008; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_71171
Blastp | Argininosuccinate synthase, chloroplastic from Arabidopsis with 83.86% of identity |
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Blastx | Argininosuccinate synthase, chloroplastic from Arabidopsis with 75.42% of identity |
Eggnog | Citrulline--aspartate ligase(COG0137) |
Kegg | Link to kegg annotations (AT4G24830) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463586.1) |
Pfam | Arginosuccinate synthase (PF00764.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |