Id Trinity | FTRINITY_DN56068_c1_g1_i1 |
---|---|
Name Transcript | Ll_transcript_71796 |
Sequence | GTTAAATTCACTTTAAGGATGTCTTTCATATTTACCTTCTCCCTTTAACACTTACATCTGACATGTTTGATTCTGTCTACTACTTTGTTCACTAAACAAC AAAAACATCTGAACCAACCTTTCAATTTCAAATTTCTCTCTCTTTCTCAACCACATTTTTACCTTCTACTTTTTACATTTGAACCAACCTTGTCACAACC ACAACCTTTCAATTTCAACTAATGTTCCTAGAATCATTAGATACAGAATCATGGAGCAAGAACAAGCTCTCTCTGTTTCTATTTCTGATTCTGTTTCTTC TGAAAATGTTTGATGCAGTTATCTTCTTTGGTCTCAGTTTGGCTCTTGGAATAGCTCGCAGGACCAGAATTCCTTATACTGTTGCCCTTGGATCTTTAGA ATATGGTACTCATCATCCGCTGAGAAAGATTGGGGCTGAAATTCGTCTTTTGATAGAAGAAGCTTTCATGGAAGAAGAAAAGAGATGAAGTGAGTTTGGA GGGAGGGAGACTTTGGTTCGTATTGGAAAAGAGACTCTGATTTTGGAGTGAGGGAAAAATAGAGTTCATCTAGCAAATCCGCAGAGTTGACTCCAGAAAT AGGAAGACTGATGAAGTGGTGTTGCTACTGCTATTATCAATGAAAGTCTTGTAGAAGGAGAAGAGGTAAGGAGGTTCCTAGAAGATGTTTGTATAACATA CCCTCAGGTTTGCGTATTACATTAAACCTCCAAAGTTTTCTGTTTTTATTTTAAAATGTGAAATTGAGATGCAATTTAACTTAATTTGACTTTTATTTAT TCTATGAATAGTTTTCTGTTTTTATTTTAAAATGTGAAATTGAGATGCAATTTAACTTAATTTGACTTTTATTTATTCTATGAATGTCTAATTCTCATGT TCTGCATGTTGTAAAAATAAGGCAAGCACAATATTCAATACTAAATTATTTACTTGAATATGTTCAAAAGCTTGAGAAGGTTGGAATATTGGAAGAGAAA GAGATACTACACCTTCACAATGCTGTCCATGTATTTGCTTATGATATTCATATTTCTTTGCTTATTTGTTGTCTTTATAGTGACTCTTATGAAAATTAAA ATTGGCTTGTTCATATTTTAATGGAATTTTTTTGTTTTCATCCCGATTTAAAGAAATTGCTTAGAAATTCTCTTCTAGTGAAGCTTTCTAAATAAGTACT TTACATCCTATGTTGGATGCTCTTCCATATTCGGTTCGTGAAACACATGTATGTAGTACCAGGGAAATGACAAAATAACATGGTTTGATACTCTACAAGG AAAGAGTCACATTAAATGGTGTTTGGTTAATTTCTAATGGAGTGAAGTAATAAACTCATTTTTGCAGTATGAAGCTTACCATATAATATCTGATTGTGAA GTTGTTGAAAATTGTTGTTTTTCCAATGGGAAAGCAAGAAGATAAGAAACACGTGCCCTTTGTATTCAACGTTCTCATACTGGAGCACAAGGCCGTTATG AAATGCTAACTAGAAGACCATATATCTGTGATGTCATCACAGATTCCGTGGTATGCTTTTCATAGAAGGTGACAAGATATTTCAAGTCTCAAAATGAACC CTTGAGTGGAAGATTTCATATGGCAGGTATGGTCACATAAAATTTGGTTGTTGTTATTTCTTCTCTTCCCTTAATGGCTTCTGATTGCTTCTGACTGTAT TCTGAACTTCCAGCTTATATAGTAAATGAATTTCATAAGTCTTTGCAGAAGAATGTGGATCATGTTTTTCATTTAAAAAAATTATTCTTTAAGATATCAA GTTCATTGAGGATATCTTAGTTCATGAAAAATTATGTCTTGTTGTGCATGTTCGGTTGAAGTACACGACATAGAAATGGTAGATGATAAATATATTCAAA ATTATAATGATTATTTTCAAAATTATAATGAATATGTTTTGCTTTTGCACTAATTTTATGATAATTTGTAGAAAATTGCTATTTTTCTTTCTAAACTATG GCTACCTAAGATATTTGAGAAATTGGCCACATGCAAGATTTAAGGGCTCTTGTTGCTAAATGATTAGTGATGGCCACACATGTAAGAGGAGAAACAATAC AAATCCCTTACCATCCGGTTGCCTTCTTATTAGAAGGATATGTCAAAACTCAAGATATTCAAGACACAACTTGATGATTTCACATGGGAATCTAAGCTTC CAAAATTTAATGATTTCATATATTTTAAATTTAATGTGTTAATATGTTTCTCTGTCTAATATGTTTTTACCAAGTTAGCATTATGAATGCGGGGTAAGGA AACATATTAGACATGAAAACATATTAACGTATATCTAATTTAGAATGCCTGAAATCATCAAATTTTGGAAACTTAAATTCCTCCATGTGAAGGAAGCAAA GTTGTTGGTGATGGTACCAACTCTTGAATGCCTTGAGTTTTGACATATTATTCTAATAAGAACTCAGCTGAATGATGATGGATTTCTATTGTTTCTCCTC TTATGTATATGACCATCACTAATCATCCAACAACAAGAGCCCTTAAATCTTGCCTAGGCAATTTCTCAAATATCCGAGGTAGCAATAATTTGGAAAGAAA AATAGCACTTTCCTGCAAATTATTATAAAATTAGTCCAAAACATATTCATTATAATTTTGAACATATTTATCATCTATCATTTCTATGTCATACACTTCA ACCGCACATGCATAACAAGACATAAATTTTCATCAACTAAGATATCCTCAATGAATATGATATCTTCAAGAAGAATTTTTGAAAATGAAAAACATAATCC CCATTCATCTGCAAAGACTTATGAAATTCATAGACTATATAAGCTGAAAGTTCATAATAAAGTCATAAGCAATCAGAAGCCATTAATGGAAGAGCAATAG TAACAATAAACAATTTTTATGTGACCATACCTGCCAGATAAAGTCTTCCACTAAAGGGTCTATTTTGAGACTTGAAACTATCTTGTCAATAGCTTCTATG AAAAAGAATTGAACCACAAAATCTGTGATGATATAATAGATGTTTGGTCTTCCGGTCAACATTTCATAATGGCCCAAAGGGTGCTTGTTTCTTATCATAT TAATAATCGAATATTATATGGTAAGCTTCATATGGCAGAAATGAGTTTATTACTTCACCACTCCATTAAAATCAACCAAATACCATTTGATTTGGCTCCT TCCTTGTAGAGTATCAAATCACGTAATTTCGTCATTTCCTTGGTACTGCATACACATGTTTCATGAACTGAAGATGGAGGAGCATCCAACATAGGATGTA AAGTACTTATTTTAGGAAGCTTCACTAGAGGAGGAGTTCTAAGCAATCCGATTTTAATTTTCATCACTATAAAGACAACCGATAAACAAAGAAGTATGAA TTTGAGAAGCAAATAAATGGATAACATCATGAAGGTGTAATATTTCTTTCTCTTCCAATATTCCAACTTTCTCAAGGTTTTGAACTTATTCAAGTAAATG ATTTAGTATTGAATACTATGCTTGCTTTTTAAACATGAGAGTTAAACATTCATAGTAAAAATAAACCCAAATTGAGTAAAATAGAATCTCAATTTGACAC TTTGAATTAAAAACATAAAACTTTGGAAGTCTAATGTAACACGCATACCTGAGGGTATGTTATACAAACATCTTCTAGGGACTTCGTCGCCTCTTCTCCT TCTACAATATTTTCATTGATAACAGTAGAAACAACACCACTGTCACCTAAAGAAGAATTTGGAAGAAATGAATATAAATTATTCTAATTATATTTACAAC CTTAACCAATACAATGCTCTAACAAACTATATAACAACCACATTAATGGTCTGTTTGGACTGAAGGTTTTAGAGGGAAAAGAAAGTGAAGACATATTTAT TGATAATAGTATGATTCTCTTAATTTAATAAAATAAAAATATGCTTTCCCTTTCCCTCTCTAACTCTCAATCTCAAAACATGCCAAATTGGATTTATGAC ACAAATTGAAGATAGAAACAAAAATATAAAAAGGAATGCATAAAAATGGAAAGAGTCTGTCTATTACCAATAAAGTCATGGAACAATCGTCGAACAATTT TGTGGGCACGAAGAAATGCAGGACATATATAACATGTAGATCCAACTTTTCCACGATGAAGTACGTAACTAAATTTGTTGGGAACATACTTGACTGAAGA AAGTTGTAGAAATTTAGAAAATGGACATTATCTTTTAAATCTTTCTAGTCACATAGAAGCTCATGTGAAGTTAAATCTATTGCTTCATCGATTGACAACA TTATGATATTAACTGTTTGAGAAATTCTTCCTTCATCAAATATCTCCTCGTAAGTAGATTGAGCACCTAATACAGCAATAAGTTCTAAAATCAGTCATAA TAATATAGTTGATGAATTCAAGTTCATAGTGCTACTACACAAACCTTCATGACTCAACAAATGCAACTTTTTTACTTCAAGTGCAAACACACATCAATGT GAGAATAGTAGTGAACATAATAATAATTTAAGTGTTTAGATGAATACAATCATAATTGATAAGTGGATTGCTCTTACCACCATAACAAATCTCCTATGAA GCACCCATACCGATACTTGTATCGAATGCATATCGTATCTATACATATTGGATATAATATGTATCTGATATGTCGATACACATATAACGATTGTTATAAA TTTTCAAATAAAGAACATATTTCTTAAACATGACTAAATACAAAATGAAATTTAATCAATGAGCAACATTATGCATG BLAST |
Tissue | flowers |
Gene name | LI_gene_57026; |
Additional information | - |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_71796
Blastp | - |
---|---|
Blastx | Sodium/hydrogen exchanger 7 from Arabidopsis with 31.4% of identity |
Eggnog | Sodium hydrogen exchanger(COG0025) |
Kegg | Link to kegg annotations (AT2G01980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460034.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |