Id Trinity | FTRINITY_DN56068_c1_g2_i5 |
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Name Transcript | Ll_transcript_71803 |
Sequence | TAAGGCAAGACCAACCTTAACCCAAAAAAGTTTAATAAGGTATATTTTGGATCGTCAATGTCATTGTCACCCACCCTGTCTTTTTTGTCCTGTTCCACAG CATCAAACCTCTATCTCTTTCTCAAGCATATCTGCTTTCTACCTTGTGATATGTTTGATTCTCTCTTAACTCAAAACTATAAAATCACCTGAATCAACCT CACAACAACGACGACGACAACAACAACGACGACGACAACAACTGTTAAACCCTTTCAATTTCTACTACTATTCCCATTCCAATGGAAGCAGTGGCTGGAT CACTAATTACATACAGAATCATGGAACAAGAACAACCTCTCTCAGTTTCTGTTTCTGATTCTGTTTCTTCTGAAAATGATGGAACTCCTTCTGATGCAGT TATCTTCTTTGGTCTCAGTTTGGCTATTGGAATAACATGCAGACACCTTCTCCGTGGGACTAGAATTCCTTATACTGTTGCCCTTCTCATCCTTGGAATT GCTCTTGGATCTTTAGAATATGGTACTCATCATCGGCTGGGAAAGATTGGGGCTGGAATTCGTCTTTGGTCAGAGATTGATCCAGACCTTCTGTTAGCTG TTTTTCTTCCTGCTCTCCTTTTCGAGAGCTCATTCTCAATGGAAATTCACCAAATTAAGAGGTGTGTTGCACAAATGTTCTTGTTAGCTGGTCCAGGTGT TGCAGTTTCAACTGTTTGTCTTGGATTTGTTTTGAAGTTTACTTTTCCATATAACTGGAGTTGGAAAACATCACTTTTGCTTGGGGGACTTCTGAGTGCA ACTGATCCTGTTGCAGTTGTCGCTTTGCTGAAAGAGCTTGGTGCAAGCAAAAAGCTAAGCACAATAATTGAAGGGGAATCCTTGATGAATGATGGGACGG CTATTGTGGTCTATACACTATTCTATCGGATGGTCCTTGGAGAGACCTTCAATTGGATTGCCATAATCAAATTTCTAGCACAAGTTTCACTAGGAGCTGT AGGAATTGGTGTTGCTTTTGGGATAGTATCTGTTTTGTGGCTTGGATTTATTTTTAATGATACAGTGATAGAGATTTCTCTAACACTTGCTGTTAGCTAC ATTGCATACTTCACTGCTCAAGAGGGTGCTGCTGTCTCTGGTGTTTTGACGGTGATGTCATTGGGAATGTTCTATTCTGCCTTTGCAAGGACAGCTTTTA AGGGTGAAAGTCAACAAAGCTTGCATCACTTTTGGGAAATGATTGCTTATATTGCTAATACATTAATATTCATCTTGAGTGGAGTTGTTATAGCTGAAAG CATACTTGGTGGTGGTAGCCATATTGTTTCTGATGGAAAATCATGGGTCTACCTCTTGCTTCTCTATGCTTATGTTCAAGTATCTCGATGCATTGTAGTT GGAGCATTATTTCCCTTTCTAAGATATTTTGGTTATGGTTTGGAGTGGAAGGAAGCTATTATTCTCACCTGGTCAGGATTGCGTGGGGCAGTTGCATTGT CTCTTTCACTATCAGTAAAGAGCTCAAGTGGCAGATCCGCTGAATTGACTCCAGAAACAGGAACACTGTGAACGGTTCAACCACACAATTTATTTTACGC TTCTTAGGTATGGACAAGTTATCAGCAGCTAAGAAACGTGTCCTTGACTTTACAAAGTACGAAATGTTGAACAAAGCATTGGAGGCTTTTGGTGAGCTTG GAGATGATGAGGAACTGGGGCCTGCTGACTGGAGTACAGTGAAGAGATATATATCATGTTTAAATAATATTGAAGGTGAACGTGTTCACCCTCATGGTGC ATCTGAAACCGATGGTAACCTCGATCCTATGAATGTGAAAGACATACGGATTCGCTTGCTAAATGGTGTCCAATCTGCTTACTGGGAGATGCTTGATGAA GGAAGAATTTCTCAAACAATAGCTAATCTCCTAATGCTGTCAGTCGAGGAAGCAATAGATTTAGCTTCAGATGAGCCTCTATGTGACTGGAAAGGTTTAA AAGATAATGTCCACTTCCCGAATTACTACAACTTTCTTCAGTCTGGCAGGTTCCCACCAAAATTAGTCACATACTTCACTGTGGAAAGATTGGAATCTGC ATGTTATATTTGTGCTGCATTTCTTCGTGCCCATAGAATTGCTCGACGACTGTTGCATGACTTTATTGGTGATAGTGGTGTTGCTTCTGCTGTTATCAAT GAAAGTCTTGTAGAAGGACAAGAGGCAAAGAAATTCCTAGAAGATGTTCGTTTAACGTATCCTCAGGTTTTGCGTGTTGTCAAAACAAGGCAAGCAACAT ATTCTGTACTAAATAATTTACTTGAATATGTTCAAAACCTTGAGAAGGTTGGAATATTGGAAGAGAAAGAGATGCTACACCTTCATGATGCTGTACAGAC TGATTTAAAGAAATTGCTTAGAAATCCTCCTCTAGTGAAGCTCCCTAAAATAAGCACTTTACATCCTATGTTGGGTGCTCTTACATCTTTGGTTCGTGAA GCACTTGTACGCAATATCAGGGAAATGATGAAATTGCGTAGTTTGACACTGTACAAGGAAGGAGCCAAATCAAATGGTATTTGGTTAATTTCTAATGGAG TGGTGAAGTGGGAAAGCAAGATGATAAAAAACAAGCATCCTTTTTATCCAACTTTTTCACACGGGAGCACATTGGGTCTATATGAAGTGCTGACTGGAAG ACCATACATTTGTGATGTGATCACAGATTCTGTGGTACAATGTTTTTTCATAGAAGCTGACAAGATAGTTTCAAGTGTTAAAATAGACCCTTCAGTGGAG GACTTTCTCTGGCAGGAAAGTGCTATTTTTCTTTCCAAACTATTGTTGCCCCAAATATTTGAGAAACTGGCTATGCAAGATTTAAGAGCTCTTGTTGCTG AACGATCAGTAATGGCCATATACATAAGAGGAGAAACAATAGAAATCCCTCGACATTCAGTTGCGTTCTTATTAGAAGGATATGTCAAAACTCAAGGTAC TCAAGAGCTGGTAACATCACCAGCAGCTCTGCTTCCTTCACATGGGAATCTAAGCTTTCAAAATTTGATGATTTCAGGTTCTAAGGAATCTAGTTTTTCT CATCAAGGATCCTCTTATCTAGTTGAAACTAGAGCAAGGATAATCATATTTGACGTTGCAGCATTTGAGGCTGATGCTGCTCTTCCTAGAAGGTCAAGTT CAATGTTATCACATGCCATGGATCATTCCCACAGAAGTTTAGGTAGACAACATAGTTCTCTTATGAGTTGGCCTGAACACTTCTACACGCAAGAACACCC TAAGCAAAACTCTGAAGGTATTGGGCAACAATCCAATAGTTTGTCTGCCAGGGCAATGCAGCTTAGCATTTACGGGAGCATGGTGGACATTCGTCACCAG AGTAGAGGTTCATCAAGCAGTCGTGCTAAGCCACCTCTGAGTTTGTCATATCCAACCATTGTGTCTGGTCATGAGCGTCCACTTGTTTCAGTCAAATCGG AAGGAGCTTCAACTGCCAAGAAAGGTAATGATGCGAGGGAGTTCACAAGAATTGTTACAAATCCACCTTTACAAAGCACAGAACAAAGGACACAAAATGA TGAAGAGGATTCAAGTGATGATTCTGCTGTTGAAGATATCATTGTGAGGATTGATTCCCCAAGTGGGCTATCTTTCCACCCCTCATCTTGAGGTACAAGA GGTGAGAAATCAGTTTTGACATTTTATTTGTGTGCACCAAGGGCATCCTAGCCAATAGTCGAAAATTAATCTCTTTCGATGTGTGTTGTGATATATTTTG TCTTGGTGCTTCTGTATAGACAATTCTGTCATGAAATCTTAGATTTATAAATGTAAAGCATATATCAATTTTATGTTTTGTTGTAAAGATAAACATATTT TTAGTAAATTATAAAGGTTGATGGAGTTGGATTCTGCAAGTTGAGTTAACCTTTAATGTTTTCTTGTAAAGATAAACACAATTTTAATAAAAGAAAGCTA TCTAATGATTAA BLAST |
Tissue | flowers |
Gene name | LI_gene_57027; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_71803
Blastp | Sodium/hydrogen exchanger 7 from Arabidopsis with 57.63% of identity |
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Blastx | Sodium/hydrogen exchanger 7 from Arabidopsis with 58.04% of identity |
Eggnog | Sodium hydrogen exchanger(COG0025) |
Kegg | Link to kegg annotations (AT2G01980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460034.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |