| Id Trinity | FTRINITY_DN56082_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_73558 |
| Sequence | TCCTTCATTCCTTGTATCTTGATGGAATTGATGGTAAAACTTCATTAGAAGGAGTCTTTAGGTGTTTAATCATTTAATTAACCTAGCAACTTCTTTATGC AATATAGCAGTGTCCTCTTGAAATTAAATGGATGCTCTACTCTAATCTTCTCCCAGTCTTCATGTTCTATTGAGCTAAAACATCCAAATTTGTAAGTAAA GTCTAGCTTAACAATTGCAGGCACTTTGGATAATTTTGTAGCAGATTCTGCATCTATTGCTTCTAGCATCAAATATCATGCTGAGTTCAAGACATCCTTT TCTCCAGAGAAGTTTGAGCTTGGTAAGGCATACCTTGCAACTGCACAAAGTGTCTGTGATTCACTCATCATAAATTGGAATGCAACATATGACTATTATG AGAAGATTAATGTTAAGCAAGCTTATTATATGTCTATGGAGTATCTACAGGGCAGGGCATTGCTAAATGCAATTGGTAATTTACAACTCTCGGGTCCTTA TGCTGAGGCTCTCAGAAAGCTGGGTCAAAATTTAGAAGATGTGGCTAATCAGGAACCAGATGCTGCCCTTGGGAATGGTGGATTAGGTAGACTTGCTTCT TGTTTTTTGGACTCATTGGCAACACTTAATTACCCTGCATGGGGATATGGACTTAGATACAAGTATGGTTTATTCAAACAGCTTATAACAAAGGATGGTC AGGAGGAAGAAGCTGAAAGCTGGCTTGAGGTATTATTCTGCCGTCCCAGATCTTGTCGCATACATTGTACGGGACAGGATCTGGGACAGCGTATCTCTAT TCTTATTTATATGCATCAATCATTAGTTAATGGCTTGAAGCTGTTTTTCATATTAGGGTAGGTTTGAATGGTTCTTTAATTCTTTTATTGCTATCTATGC GTGCTTTGCAAGGTTATTCCTATAAGCAAGTTACAAGTTTTTTTACTGATTGAAGTGACTTTACAGATGGGAAATCCTTGGGAAATTCAGAGAAATGATG TATCTTATCCAGTTAAGTTCTATGGAGAAGTTATTTCAGGGCCAAATGGAACTAAACAGTGGATTGGAGGAGAAAATATATCAGCTGTTGCTTATGATGT TCCAATACCTGGATACAAAACTAGAACAACTATTAACCTGAGATTGTGGTCCATTAAAGTTTCACCAGCACAATTTGATTTACAAGCTTTCAATACGGGA GATCATGCCAAAGCATATGCTGCCATGAACAATGCAGAGAAAGTATTTCGATACTCCTTTATAAACTCTATACCCAAATTTGACCCAAAAAATTACTTCT CCTGATTTAGTCTCGGAGAAATGAAAAATCTCAATTTGTTAAAATGTCGACCAAATTATTCATTTTCAGGACAAATTTTAAGAACATATCAAATAGGGGT CACATTTTTTATCGGTTGTGGATATTAAGTCCTTCTCTTTTTAACATTTAGAATGTTGTAATTATGATACTTTTGCTCCCAAATTTAGTGTCCCCTGTAA ACTTTTAAGGTTTGTTTGGGACATTTTTGTAGGAGAAGGCTTTGGAGCCGTCTCAGCACTATATTTCATGCCTCCTTCCTCCTTCAAAACTCAAATCGCA AACAAAGCTAAAGGGGTATAATGAAAGGTTATATATGCCTAGTTGCCCACTAATAAAACGAGAAGTAAATTACATAGATATGAAGAATAGATAGCTTTTA CTCTTCTTGTTTCAAATTGTAATGGAGCCTTCTTCTCATCCACCAATAATCAGAAACGTTTATTTGCATATAAAATTTAAGTTAATTGGACAACCTGCAT AAATCACTAGTGATTCTCATTTTTTTATGTTACATTGCAAACAGATTTGCTATGTGTTGTACCCTGGAGATGAATCCTTAGAAGGAAAGATACTGCGATT GAAGCAACAATATACATTATGCTCTGCATCTCTCCAGGATATTTTTGCACGCTTTGAAAAGAGATCAGGAAATACAGTAAACTGGGACACTTTTCCAGAA AAAGTGGTGGTTCAAATGAATGATACTCACCCAACACTCTGCATTCCTGAACTGATTAGGATATTGATAGATGGAAAGGGTTTAAGCTGGGAAAAAGCTT GGGATATTACCAAAAGAACGGTTGCTTACACAAACCACACAGTTCTGCCGGAAGCGCTAGAGAAATGGAGCTTGACACTTCTGCAGGATTTGCTTCCTCG ACATGTGGAGATAATAAGAAGAATAGATGAAGAGTTCATACTTGAAATTATTTCCAAGTATGGGACACATGATCTTGACTTGATACAACAAAAGCTTAGA AAGATGAGAATACTAGAAAATATTGAGTTACCCAACTCAGTGATAGAGCTGATTAATAATTTAAAGAAGGCTCCTGCCTCTGAGGATGTTAAGGAAATTG GTCTTAATGATAATGATATAAAGGCAACAGAAGAGAAAGAAGATGATGAAGTCGGGGAAGAGGAACAACAACAAGAAGAAGAAGAAGATAACAATTCTAC TAGGGAGGATACTGATAAGAAAACGGAGTGGACATTCAAAGTTGATCCGAATTTGCCAAGGATGGTTCGCATGGCTAATCTTTGTGTTGTTGGTGGACTT TCTGTGAATGGAGTAGCTGAGATTCATAGTGAGATTGTGAAAGATGAAGTTTTCAATGAATTTTACAAGTTGTGGCCAGAGAAATTCCAGAATAAAACAA ATGGGGTGACCCCTAGAAGATGGATCCGTTTTTGTAATCCTGATCTTAGTAACATCATAACCAAGTGGATTGGAACAGATGATTGGGTAACTGATCTTCA GAAGTTGGCTGTACTTCGCAAGTTTGCAGATAATGAGGATCTACAATTGGAGTGGACAGCATCCAAAAAAAGAAACAAGATTAAGGTTGCATCATTTCTC AAAGAGAAAACTGGTTATGTTGTCAGTCCAAATGCAATGTTTGATGTACAGGTGAAGCGAATTCATGAATATAAGCGGCAATTACTGAATATTTTGGGAA TTGTTTATCGCTACAAAAAGATGAAAGAATTGAGTGCCGAAGAAAGAAATCAAAAGTTTGTTCCTCGGGTTTGTATTTTCGGAGGAAAAGCATTTGCAAC ATATGTTCAAGCCAAGAGGATTGTAAAATTCATCGCAGATGTAGGAGCTACAGTCAATCATGATCCAGAAATTGGAGATCTTTTGAAGGTTGTATTTGTC CCTGATTACAATGTCAGTGTTGCTGAAGTGCTGATTCCTGGCAGTGAGTTGTCCCAGCACATTAGCACTGCTGGAATGGAGGCTAGTGGAACAAGCAACA TGAAATTTGCAATGAATGGGTGTGTACTTATAGGAACTCTTGATGGTGCTAATGTTGAAATAAGAGAAGAGGTTGGAGAAGATAACTTCTTTCTTTTTGG TGCACGAGCTAACGAGATCGCTGGGCTGCGGAAAGAAAGAGCTGAGGGAAAGTTTGTATCAGACCCAAGGTTTGAAGAAGTAAAGACATATGTTAGAAGT GGTGTTTTTGGCCCCTACAACTATGAAGAATTGATGGGATCATTGGAAGGAAATGAAGGGTATGGTCGTGCCGATTATTTCCTTGTTGGCAAGGACTTTC CTAACTACTTGGAGTCCCAAGAAGCAGTTGATCAGGCATATCGTGATCAAAAGAGATGGACAAGAATGTCAATTTTGAACACAGCTGGTTCATACAAATT CAGTAGTGACCGGACTATTCATGAATATGCTAGAGACATATGGAAAATTGAACCTGTTGTCTTACCTTGAAAAGTTACATGTTGAGTTTTTTAGCATATT CAGCTTGTTCCTTATCTCAGAATTAAGTTCAGAAGGGCTTGAAAACTGAAGAAGAGGTTAAGTTCACTTGAATAGCCATGCAAAGAATATGTGAGCTTTT GTTGCCCCGGGAGAGTAAAGCTTATCTTCATAGCATTTTGTAATACATTCCCATTCTAAACTTTTCAATCATATTGAAATTAAATTAAATTTCAATCTTC AATTTAAGACACATGGAATGATATATTTTAACTCTGTGGAACAATAGATTTTCCCCAAGCATAGAAATGCTCATAAGGATTTAGGGAGTCATGCAGGATC AAGTAGAATTGTTTATCACTTTTCAACCAATATTTTTCTCAGACATGGTTTCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57137; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_73558
| Blastp | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 74.21% of identity |
|---|---|
| Blastx | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 76.19% of identity |
| Eggnog | Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity)(COG0058) |
| Kegg | Link to kegg annotations (102603391) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445910.1) |
| Pfam | Carbohydrate phosphorylase (PF00343.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |