| Id Trinity | FTRINITY_DN56082_c3_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_73571 |
| Sequence | TCCTTCATTCCTTGTATCTTGATGGAATTGATGGTAAAACTTCATTAGAAGGAGTCTTTAGGTGTTTAATCATTTAATTAACCTAGCAACTTCTTTATGC AATATAGCAGTGTCCTCTTGAAATTAAATGGATGCTCTACTCTAATCTTCTCCCAGTCTTCATGTTCTATTGAGCTAAAACATCCAAATTTGTAAGTAAA GTCTAGCTTAACAATTGCAGGCACTTTGGATAATTTTGTAGCAGATTCTGCATCTATTGCTTCTAGCATCAAATATCATGCTGAGTTCAAGACATCCTTT TCTCCAGAGAAGTTTGAGCTTGGTAAGGCATACCTTGCAACTGCACAAAGTGTCTGTGATTCACTCATCATAAATTGGAATGCAACATATGACTATTATG AGAAGATTAATGTTAAGCAAGCTTATTATATGTCTATGGAGTATCTACAGGGCAGGGCATTGCTAAATGCAATTGGTAATTTACAACTCTCGGGTCCTTA TGCTGAGGCTCTCAGAAAGCTGGGTCAAAATTTAGAAGATGTGGCTAATCAGGAACCAGATGCTGCCCTTGGGAATGGTGGATTAGGTAGACTTGCTTCT TGTTTTTTGGACTCATTGGCAACACTTAATTACCCTGCATGGGGATATGGACTTAGATACAAGTATGGTTTATTCAAACAGCTTATAACAAAGGATGGTC AGGAGGAAGAAGCTGAAAGCTGGCTTGAGGTATTATTCTGCCGTCCCAGATCTTGTCGCATACATTGTACGGGACAGGATCTGGGACAGCGTATCTCTAT TCTTATTTATATGCATCAATCATTAGTTAATGGCTTGAAGCTGTTTTTCATATTAGGGTAGGTTTGAATGGTTCTTTAATTCTTTTATTGCTATCTATGC GTGCTTTGCAAGGTTATTCCTATAAGCAAGTTACAAGTTTTTTTACTGATTGAAGTGACTTTACAGATGGGAAATCCTTGGGAAATTCAGAGAAATGATG TATCTTATCCAGTTAAGTTCTATGGAGAAGTTATTTCAGGGCCAAATGGAACTAAACAGTGGATTGGAGGAGAAAATATATCAGCTGTTGCTTATGATGT TCCAATACCTGGATACAAAACTAGAACAACTATTAACCTGAGATTGTGGTCCATTAAAGTTTCACCAGCACAATTTGATTTACAAGCTTTCAATACGGGA GATCATGCCAAAGCATATGCTGCCATGAACAATGCAGAGAAAATTTGCTATGTGTTGTACCCTGGAGATGAATCCTTAGAAGGAAAGATACTGCGATTGA AGCAACAATATACATTATGCTCTGCATCTCTCCAGGATATTTTTGCACGCTTTGAAAAGAGATCAGGAAATACAGTAAACTGGGACACTTTTCCAGAAAA AGTGGTGGTTCAAATGAATGATACTCACCCAACACTCTGCATTCCTGAACTGATTAGGATATTGATAGATGGAAAGGGTTTAAGCTGGGAAAAAGCTTGG GATATTACCAAAAGAACGGTTGCTTACACAAACCACACAGTTCTGCCGGAAGCGCTAGAGAAATGGAGCTTGACACTTCTGCAGGATTTGCTTCCTCGAC ATGTGGAGATAATAAGAAGAATAGATGAAGAGTTCATACTTGAAATTATTTCCAAGTATGGGACACATGATCTTGACTTGATACAACAAAAGCTTAGAAA GATGAGAATACTAGAAAATATTGAGTTACCCAACTCAGTGATAGAGCTGATTAATAATTTAAAGAAGGCTCCTGCCTCTGAGGATGTTAAGGAAATTGGT CTTAATGATAATGATATAAAGGCAACAGAAGAGAAAGAAGATGATGAAGTCGGGGAAGAGGAACAACAACAAGAAGAAGAAGAAGATAACAATTCTACTA GGGAGGATACTGATAAGAAAACGGAGTGGACATTCAAAGTTGATCCGAATTTGCCAAGGATGGTTCGCATGGCTAATCTTTGTGTTGTTGGTGGACTTTC TGTGAATGGAGTAGCTGAGATTCATAGTGAGATTGTGAAAGATGAAGTTTTCAATGAATTTTACAAGTTGTGGCCAGAGAAATTCCAGAATAAAACAAAT GGGGTGACCCCTAGAAGATGGATCCGTTTTTGTAATCCTGATCTTAGTAACATCATAACCAAGTGGATTGGAACAGATGATTGGGTAACTGATCTTCAGA AGTTGGCTGTACTTCGCAAGTTTGCAGATAATGAGGATCTACAATTGGAGTGGACAGCATCCAAAAAAAGAAACAAGATTAAGGTTGCATCATTTCTCAA AGAGAAAACTGGTTATGTTGTCAGTCCAAATGCAATGTTTGATGTACAGGTGAAGCGAATTCATGAATATAAGCGGCAATTACTGAATATTTTGGGAATT GTTTATCGCTACAAAAAGATGAAAGAATTGAGTGCCGAAGAAAGAAATCAAAAGTTTGTTCCTCGGGTTTGTATTTTCGGAGGAAAAGCATTTGCAACAT ATGTTCAAGCCAAGAGGATTGTAAAATTCATCGCAGATGTAGGAGCTACAGTCAATCATGATCCAGAAATTGGAGATCTTTTGAAGGTTGTATTTGTCCC TGATTACAATGTCAGTGTTGCTGAAGTGCTGATTCCTGGCAGTGAGTTGTCCCAGCACATTAGCACTGCTGGAATGGAGGCTAGTGGAACAAGCAACATG AAATTTGCAATGAATGGGTGTGTACTTATAGGAACTCTTGATGGTGCTAATGTTGAAATAAGAGAAGAGGTTGGAGAAGATAACTTCTTTCTTTTTGGTG CACGAGCTAACGAGATCGCTGGGCTGCGGAAAGAAAGAGCTGAGGGAAAGTTTGTATCAGACCCAAGGTTTGAAGAAGTAAAGACATATGTTAGAAGTGG TGTTTTTGGCCCCTACAACTATGAAGAATTGATGGGATCATTGGAAGGAAATGAAGGGTATGGTCGTGCCGATTATTTCCTTGTTGGCAAGGACTTTCCT AACTACTTGGAGTCCCAAGAAGCAGTTGATCAGGCATATCGTGATCAAAAGAGATGGACAAGAATGTCAATTTTGAACACAGCTGGTTCATACAAATTCA GTAGTGACCGGACTATTCATGAATATGCTAGAGACATATGGAAAATTGAACCTGTTGTCTTACCTTGAAAAGTTACATGTTGAGTTTTTTAGCATATTCA GCTTGTTCCTTATCTCAGAATTAAGTTCAGAAGGGCTTGAAAACTGAAGAAGAGGTTAAGTTCACTTGAATAGCCATGCAAAGAATATGTGAGCTTTTGT TGCCCCGGGAGAGTAAAGCTTATCTTCATAGCATTTTGTAATACATTCCCATTCTAAACTTTTCAATCATATTGAAATTAAATTAAATTTCAATCTTCAA TTTAAGACACATGGAATGATATATTTTAACTCTGTGGAACAATAGATTTTCCCCAAGCATAGAAATGCTCATAAGGATTTAGGGAGTCATGCAGGATCAA GTAGAATTGTTTATCACTTTTCAACCAATATTTTTCTCAGACATGGTTTCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57137; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_73571
| Blastp | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 74.34% of identity |
|---|---|
| Blastx | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 76.01% of identity |
| Eggnog | Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity)(COG0058) |
| Kegg | Link to kegg annotations (102603391) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_012572563.1) |
| Pfam | Carbohydrate phosphorylase (PF00343.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |