| Id Trinity | FTRINITY_DN56082_c3_g1_i23 |
|---|---|
| Name Transcript | Ll_transcript_73584 |
| Sequence | TCCTTCATTCCTTGTATCTTGATGGAATTGATGGTAAAACTTCATTAGAAGGAGTCTTTAGGTGTTTAATCATTTAATTAACCTAGCAACTTCTTTATGC AATATAGCAGTGTCCTCTTGAAATTAAATGGATGCTCTACTCTAATCTTCTCCCAGTCTTCATGTTCTATTGAGCTAAAACATCCAAATTTGTAAGTAAA GTCTAGCTTAACAATTGCAGGCACTTTGGATAATTTTGTAGCAGATTCTGCATCTATTGCTTCTAGCATCAAATATCATGCTGAGTTCAAGACATCCTTT TCTCCAGAGAAGTTTGAGCTTGGTAAGGCATACCTTGCAACTGCACAAAGTGTCTGTGATTCACTCATCATAAATTGGAATGCAACATATGACTATTATG AGAAGATTAATGTTAAGCAAGCTTATTATATGTCTATGGAGTATCTACAGGGCAGGGCATTGCTAAATGCAATTGGTAATTTACAACTCTCGGGTCCTTA TGCTGAGGCTCTCAGAAAGCTGGGTCAAAATTTAGAAGATGTGGCTAATCAGGAACCAGATGCTGCCCTTGGGAATGGTGGATTAGGTAGACTTGCTTCT TGTTTTTTGGACTCATTGGCAACACTTAATTACCCTGCATGGGGATATGGACTTAGATACAAGTATGGTTTATTCAAACAGCTTATAACAAAGGATGGTC AGGAGGAAGAAGCTGAAAGCTGGCTTGAGATGGGAAATCCTTGGGAAATTCAGAGAAATGATGTATCTTATCCAGTTAAGTTCTATGGAGAAGTTATTTC AGGGCCAAATGGAACTAAACAGTGGATTGGAGGAGAAAATATATCAGCTGTTGCTTATGATGTTCCAATACCTGGATACAAAACTAGAACAACTATTAAC CTGAGATTGTGGTCCATTAAAGTTTCACCAGCACAATTTGATTTACAAGCTTTCAATACGGGAGATCATGCCAAAGCATATGCTGCCATGAACAATGCAG AGAAAATTTGCTATGTGTTGTACCCTGGAGATGAATCCTTAGAAGGAAAGATACTGCGATTGAAGCAACAATATACATTATGCTCTGCATCTCTCCAGGA TATTTTTGCACGCTTTGAAAAGAGATCAGGAAATACAGTAAACTGGGACACTTTTCCAGAAAAAGTGGTGGTTCAAATGAATGATACTCACCCAACACTC TGCATTCCTGAACTGATTAGGATATTGATAGATGGAAAGGGTTTAAGCTGGGAAAAAGCTTGGGATATTACCAAAAGAACGGTTGCTTACACAAACCACA CAGTTCTGCCGGAAGCGCTAGAGAAATGGAGCTTGACACTTCTGCAGGATTTGCTTCCTCGACATGTGGAGATAATAAGAAGAATAGATGAAGAGTTCAT ACTTGAAATTATTTCCAAGTATGGGACACATGATCTTGACTTGATACAACAAAAGCTTAGAAAGATGAGAATACTAGAAAATATTGAGTTACCCAACTCA GTGATAGAGCTGATTAATAATTTAAAGAAGGCTCCTGCCTCTGAGGATGTTAAGGAAATTGGTCTTAATGATAATGATATAAAGGCAACAGAAGAGAAAG AAGATGATGAAGTCGGGGAAGAGGAACAACAACAAGAAGAAGAAGAAGATAACAATTCTACTAGGGAGGATACTGATAAGAAAACGGAGTGGACATTCAA AGTTGATCCGAATTTGCCAAGGATGGTTCGCATGGCTAATCTTTGTGTTGTTGGTGGACTTTCTGTGAATGGAGTAGCTGAGATTCATAGTGAGATTGTG AAAGATGAAGTTTTCAATGAATTTTACAAGTTGTGGCCAGAGAAATTCCAGAATAAAACAAATGGGGTGACCCCTAGAAGATGGATCCGTTTTTGTAATC CTGATCTTAGTAACATCATAACCAAGTGGATTGGAACAGATGATTGGGTAACTGATCTTCAGAAGTTGGCTGTACTTCGCAAGTTTGCAGATAATGAGGA TCTACAATTGGAGTGGACAGCATCCAAAAAAAGAAACAAGATTAAGGTTGCATCATTTCTCAAAGAGAAAACTGGTTATGTTGTCAGTCCAAATGCAATG TTTGATGTACAGGTGAAGCGAATTCATGAATATAAGCGGCAATTACTGAATATTTTGGGAATTGTTTATCGCTACAAAAAGATGAAAGAATTGAGTGCCG AAGAAAGAAATCAAAAGTTTGTTCCTCGGGTTTGTATTTTCGGAGGAAAAGCATTTGCAACATATGTTCAAGCCAAGAGGATTGTAAAATTCATCGCAGA TGTAGGAGCTACAGTCAATCATGATCCAGAAATTGGAGATCTTTTGAAGGTTGTATTTGTCCCTGATTACAATGTCAGTGTTGCTGAAGTGCTGATTCCT GGCAGTGAGTTGTCCCAGCACATTAGCACTGCTGGAATGGAGGCTAGTGGAACAAGCAACATGAAATTTGCAATGAATGGGTGTGTACTTATAGGAACTC TTGATGGTGCTAATGTTGAAATAAGAGAAGAGGTTGGAGAAGATAACTTCTTTCTTTTTGGTGCACGAGCTAACGAGATCGCTGGGCTGCGGAAAGAAAG AGCTGAGGGAAAGGCAAGTTTGAAACTAAACCGGAAAACAAGAAACAGCATTTGGTGAAAATAAACACAAAATCCTAGTTACTACAAAAGCTTAAACTAG CTCACCTTTCTAATCTCAGCAATGAGATCATGATATTAATTCCCATATAATGTATTAGCTTAAGTTCTGGATATTATAAGAATATTAAGTTTTAAAGTCA TAAAATTTGGCTTCTATAGATCCATTAAGCCATTATTATTTATGTCTTAACATAGACCCAGTGGACTTATCATAATAATCACAATCTTTTATGGTATCTT CCTTACTGTAAATGCAGTTTGTATCAGACCCAAGGTTTGAAGAAGTAAAGACATATGTTAGAAGTGGTGTTTTTGGCCCCTACAACTATGAAGAATTGAT GGGATCATTGGAAGGAAATGAAGGGTATGGTCGTGCCGATTATTTCCTTGTTGGCAAGGACTTTCCTAACTACTTGGAGTCCCAAGAAGCAGTTGATCAG GCATATCGTGATCAAAAGAGATGGACAAGAATGTCAATTTTGAACACAGCTGGTTCATACAAATTCAGTAGTGACCGGACTATTCATGAATATGCTAGAG ACATATGGAAAATTGAACCTGTTGTCTTACCTTGAAAAGTTACATGTTGAGTTTTTTAGCATATTCAGCTTGTTCCTTATCTCAGAATTAAGTTCAGAAG GGCTTGAAAACTGAAGAAGAGGTTAAGTTCACTTGAATAGCCATGCAAAGAATATGTGAGCTTTTGTTGCCCCGGGAGAGTAAAGCTTATCTTCATAGCA TTTTGTAATACATTCCCATTCTAAACTTTTCAATCATATTGAAATTAAATTAAATTTCAATCTTCAATTTAAGACACATGGAATGATATATTTTAACTCT GTGGAACAATAGATTTTCCCCAAGCATAGAAATGCTCATAAGGATTTAGGGAGTCATGCAGGATCAAGTAGAATTGTTTATCACTTTTCAACCAATATTT TTCTCAGACATGGTTTCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57137; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_73584
| Blastp | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 74.83% of identity |
|---|---|
| Blastx | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 76.62% of identity |
| Eggnog | Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity)(COG0058) |
| Kegg | Link to kegg annotations (102603391) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445910.1) |
| Pfam | Carbohydrate phosphorylase (PF00343.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |