| Id Trinity | FTRINITY_DN56082_c3_g1_i30 |
|---|---|
| Name Transcript | Ll_transcript_73592 |
| Sequence | CAAATGCAAGAAAGAATAAAAAGGATAAGAAGATAAAGACAGACTCCATCTTCTATCACTGACTTCTCCCCTTTTTCCTCACAGGTCACAACATTATTTC TACACATACTGAATTAGAGTATTGCAGCAATGGCTGCTCTACCGTTCTCATCAATCTCTAGGCATGCCAACTCTCCTTTACATTACAATTCCAAGTCAAG CATCACAGGTTTCAATCAAAGAAACAGTATTTGCTGGCTGTTTTTCATCAGAAAATCAAACTCCACAAGGGCACTAAGAAAGCTGGTTGTTAAGAATGTT GCCAGTGATAAAAGGCAGGAACTGAATGAACCATTGTCTGAACAAGGCACTTTGGATAATTTTGTAGCAGATTCTGCATCTATTGCTTCTAGCATCAAAT ATCATGCTGAGTTCAAGACATCCTTTTCTCCAGAGAAGTTTGAGCTTGGTAAGGCATACCTTGCAACTGCACAAAGTGTCTGTGATTCACTCATCATAAA TTGGAATGCAACATATGACTATTATGAGAAGATTAATGTTAAGCAAGCTTATTATATGTCTATGGAGTATCTACAGGGCAGGGCATTGCTAAATGCAATT GGTAATTTACAACTCTCGGGTCCTTATGCTGAGGCTCTCAGAAAGCTGGGTCAAAATTTAGAAGATGTGGCTAATCAGGAACCAGATGCTGCCCTTGGGA ATGGTGGATTAGGTAGACTTGCTTCTTGTTTTTTGGACTCATTGGCAACACTTAATTACCCTGCATGGGGATATGGACTTAGATACAAGTATGGTTTATT CAAACAGCTTATAACAAAGGATGGTCAGGAGGAAGAAGCTGAAAGCTGGCTTGAGGTATTATTCTGCCGTCCCAGATCTTGTCGCATACATTGTACGGGA CAGGATCTGGGACAGCGTATCTCTATTCTTATTTATATGCATCAATCATTAGTTAATGGCTTGAAGCTGTTTTTCATATTAGGGTAGGTTTGAATGGTTC TTTAATTCTTTTATTGCTATCTATGCGTGCTTTGCAAGGTTATTCCTATAAGCAAGTTACAAGTTTTTTTACTGATTGAAGTGACTTTACAGATGGGAAA TCCTTGGGAAATTCAGAGAAATGATGTATCTTATCCAGTTAAGTTCTATGGAGAAGTTATTTCAGGGCCAAATGGAACTAAACAGTGGATTGGAGGAGAA AATATATCAGCTGTTGCTTATGATGTTCCAATACCTGGATACAAAACTAGAACAACTATTAACCTGAGATTGTGGTCCATTAAAGTTTCACCAGCACAAT TTGATTTACAAGCTTTCAATACGGGAGATCATGCCAAAGCATATGCTGCCATGAACAATGCAGAGAAAATTTGCTATGTGTTGTACCCTGGAGATGAATC CTTAGAAGGAAAGATACTGCGATTGAAGCAACAATATACATTATGCTCTGCATCTCTCCAGGATATTTTTGCACGCTTTGAAAAGAGATCAGGAAATACA GTAAACTGGGACACTTTTCCAGAAAAAGTGGTGGTTCAAATGAATGATACTCACCCAACACTCTGCATTCCTGAACTGATTAGGATATTGATAGATGGAA AGGGTTTAAGCTGGGAAAAAGCTTGGGATATTACCAAAAGAACGGTTGCTTACACAAACCACACAGTTCTGCCGGAAGCGCTAGAGAAATGGAGCTTGAC ACTTCTGCAGGATTTGCTTCCTCGACATGTGGAGATAATAAGAAGAATAGATGAAGAGTTCATACTTGAAATTATTTCCAAGTATGGGACACATGATCTT GACTTGATACAACAAAAGCTTAGAAAGATGAGAATACTAGAAAATATTGAGTTACCCAACTCAGTGATAGAGCTGATTAATAATTTAAAGAAGGCTCCTG CCTCTGAGGATGTTAAGGAAATTGGTCTTAATGATAATGATATAAAGGCAACAGAAGAGAAAGAAGATGATGAAGTCGGGGAAGAGGAACAACAACAAGA AGAAGAAGAAGATAACAATTCTACTAGGGAGGATACTGATAAGAAAACGGAGTGGACATTCAAAGTTGATCCGAATTTGCCAAGGATGGTTCGCATGGCT AATCTTTGTGTTGTTGGTGGACTTTCTGTGAATGGAGTAGCTGAGATTCATAGTGAGATTGTGAAAGATGAAGTTTTCAATGAATTTTACAAGTTGTGGC CAGAGAAATTCCAGAATAAAACAAATGGGGTGACCCCTAGAAGATGGATCCGTTTTTGTAATCCTGATCTTAGTAACATCATAACCAAGTGGATTGGAAC AGATGATTGGGTAACTGATCTTCAGAAGTTGGCTGTACTTCGCAAGTTTGCAGATAATGAGGATCTACAATTGGAGTGGACAGCATCCAAAAAAAGAAAC AAGATTAAGGTTGCATCATTTCTCAAAGAGAAAACTGGTTATGTTGTCAGTCCAAATGCAATGTTTGATGTACAGGTGAAGCGAATTCATGAATATAAGC GGCAATTACTGAATATTTTGGGAATTGTTTATCGCTACAAAAAGATGAAAGAATTGAGTGCCGAAGAAAGAAATCAAAAGTTTGTTCCTCGGGTTTGTAT TTTCGGAGGAAAAGCATTTGCAACATATGTTCAAGCCAAGAGGATTGTAAAATTCATCGCAGATGTAGGAGCTACAGTCAATCATGATCCAGAAATTGGA GATCTTTTGAAGGTATGATTCAACTTAGGTGATTGGTAACTAGACAATGACATGACAAGACCATTATAGTCATGCCAAGCTTTTTGTTGCCTATGATGCC TAATGAAAATGATGGGGATGAACACAAATGTGAATGCTTTATTTCATGTGGCACCAGGTCTTAGACCTCCTTTGTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57137; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_73592
| Blastp | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 69.5% of identity |
|---|---|
| Blastx | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 71.56% of identity |
| Eggnog | Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity)(COG0058) |
| Kegg | Link to kegg annotations (102603391) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_012572563.1) |
| Pfam | Carbohydrate phosphorylase (PF00343.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |