| Id Trinity | FTRINITY_DN56082_c3_g1_i31 |
|---|---|
| Name Transcript | Ll_transcript_73593 |
| Sequence | CAAATGCAAGAAAGAATAAAAAGGATAAGAAGATAAAGACAGACTCCATCTTCTATCACTGACTTCTCCCCTTTTTCCTCACAGGTCACAACATTATTTC TACACATACTGAATTAGAGTATTGCAGCAATGGCTGCTCTACCGTTCTCATCAATCTCTAGGCATGCCAACTCTCCTTTACATTACAATTCCAAGTCAAG CATCACAGGTTTCAATCAAAGAAACAGTATTTGCTGGCTGTTTTTCATCAGAAAATCAAACTCCACAAGGGCACTAAGAAAGCTGGTTGTTAAGAATGTT GCCAGTGATAAAAGGCAGGAACTGAATGAACCATTGTCTGAACAAGGCACTTTGGATAATTTTGTAGCAGATTCTGCATCTATTGCTTCTAGCATCAAAT ATCATGCTGAGTTCAAGACATCCTTTTCTCCAGAGAAGTTTGAGCTTGGTAAGGCATACCTTGCAACTGCACAAAGTGTCTGTGATTCACTCATCATAAA TTGGAATGCAACATATGACTATTATGAGAAGATTAATGTTAAGCAAGCTTATTATATGTCTATGGAGTATCTACAGGGCAGGGCATTGCTAAATGCAATT GGTAATTTACAACTCTCGGGTCCTTATGCTGAGGCTCTCAGAAAGCTGGGTCAAAATTTAGAAGATGTGGCTAATCAGGAACCAGATGCTGCCCTTGGGA ATGGTGGATTAGGTAGACTTGCTTCTTGTTTTTTGGACTCATTGGCAACACTTAATTACCCTGCATGGGGATATGGACTTAGATACAAGTATGGTTTATT CAAACAGCTTATAACAAAGGATGGTCAGGAGGAAGAAGCTGAAAGCTGGCTTGAGATGGGAAATCCTTGGGAAATTCAGAGAAATGATGTATCTTATCCA GTTAAGTTCTATGGAGAAGTTATTTCAGGGCCAAATGGAACTAAACAGTGGATTGGAGGAGAAAATATATCAGCTGTTGCTTATGATGTTCCAATACCTG GATACAAAACTAGAACAACTATTAACCTGAGATTGTGGTCCATTAAAGTTTCACCAGCACAATTTGATTTACAAGCTTTCAATACGGGAGATCATGCCAA AGCATATGCTGCCATGAACAATGCAGAGAAAGTATTTCGATACTCCTTTATAAACTCTATACCCAAATTTGACCCAAAAAATTACTTCTCCTGATTTAGT CTCGGAGAAATGAAAAATCTCAATTTGTTAAAATGTCGACCAAATTATTCATTTTCAGGACAAATTTTAAGAACATATCAAATAGGGGTCACATTTTTTA TCGGTTGTGGATATTAAGTCCTTCTCTTTTTAACATTTAGAATGTTGTAATTATGATACTTTTGCTCCCAAATTTAGTGTCCCCTGTAAACTTTTAAGGT TTGTTTGGGACATTTTTGTAGGAGAAGGCTTTGGAGCCGTCTCAGCACTATATTTCATGCCTCCTTCCTCCTTCAAAACTCAAATCGCAAACAAAGCTAA AGGGGTATAATGAAAGGTTATATATGCCTAGTTGCCCACTAATAAAACGAGAAGTAAATTACATAGATATGAAGAATAGATAGCTTTTACTCTTCTTGTT TCAAATTGTAATGGAGCCTTCTTCTCATCCACCAATAATCAGAAACGTTTATTTGCATATAAAATTTAAGTTAATTGGACAACCTGCATAAATCACTAGT GATTCTCATTTTTTTATGTTACATTGCAAACAGATTTGCTATGTGTTGTACCCTGGAGATGAATCCTTAGAAGGAAAGATACTGCGATTGAAGCAACAAT ATACATTATGCTCTGCATCTCTCCAGGATATTTTTGCACGCTTTGAAAAGAGATCAGGAAATACAGTAAACTGGGACACTTTTCCAGAAAAAGTGGTGGT TCAAATGAATGATACTCACCCAACACTCTGCATTCCTGAACTGATTAGGATATTGATAGATGGAAAGGGTTTAAGCTGGGAAAAAGCTTGGGATATTACC AAAAGTCTGATCCCTCTTTCAATGGCTCTTCTGTTAGAACGGTTGCTTACACAAACCACACAGTTCTGCCGGAAGCGCTAGAGAAATGGAGCTTGACACT TCTGCAGGATTTGCTTCCTCGACATGTGGAGATAATAAGAAGAATAGATGAAGAGTTCATACTTGAAATTATTTCCAAGTATGGGACACATGATCTTGAC TTGATACAACAAAAGCTTAGAAAGATGAGAATACTAGAAAATATTGAGTTACCCAACTCAGTGATAGAGCTGATTAATAATTTAAAGAAGGCTCCTGCCT CTGAGGATGTTAAGGAAATTGGTCTTAATGATAATGATATAAAGGCAACAGAAGAGAAAGAAGATGATGAAGTCGGGGAAGAGGAACAACAACAAGAAGA AGAAGAAGATAACAATTCTACTAGGGAGGATACTGATAAGAAAACGGAGTGGACATTCAAAGTTGATCCGAATTTGCCAAGGATGGTTCGCATGGCTAAT CTTTGTGTTGTTGGTGGACTTTCTGTGAATGGAGTAGCTGAGATTCATAGTGAGATTGTGAAAGATGAAGTTTTCAATGAATTTTACAAGTTGTGGCCAG AGAAATTCCAGAATAAAACAAATGGGGTGACCCCTAGAAGATGGATCCGTTTTTGTAATCCTGATCTTAGTAACATCATAACCAAGTGGATTGGAACAGA TGATTGGGTAACTGATCTTCAGAAGTTGGCTGTACTTCGCAAGTTTGCAGATAATGAGGATCTACAATTGGAGTGGACAGCATCCAAAAAAAGAAACAAG ATTAAGGTTGCATCATTTCTCAAAGAGAAAACTGGTTATGTTGTCAGTCCAAATGCAATGTTTGATGTACAGGTGAAGCGAATTCATGAATATAAGCGGC AATTACTGAATATTTTGGGAATTGTTTATCGCTACAAAAAGATGAAAGAATTGAGTGCCGAAGAAAGAAATCAAAAGTTTGTTCCTCGGGTTTGTATTTT CGGAGGAAAAGCATTTGCAACATATGTTCAAGCCAAGAGGATTGTAAAATTCATCGCAGATGTAGGAGCTACAGTCAATCATGATCCAGAAATTGGAGAT CTTTTGAAGGTTGTATTTGTCCCTGATTACAATGTCAGTGTTGCTGAAGTGCTGATTCCTGGCAGTGAGTTGTCCCAGCACATTAGCACTGCTGGAATGG AGGCTAGTGGAACAAGCAACATGAAATTTGCAATGAATGGGTGTGTACTTATAGGAACTCTTGATGGTGCTAATGTTGAAATAAGAGAAGAGGTTGGAGA AGATAACTTCTTTCTTTTTGGTGCACGAGCTAACGAGATCGCTGGGCTGCGGAAAGAAAGAGCTGAGGGAAAGTTTGTATCAGACCCAAGGTTTGAAGAA GTAAAGACATATGTTAGAAGTGGTGTTTTTGGCCCCTACAACTATGAAGAATTGATGGGATCATTGGAAGGAAATGAAGGGTATGGTCGTGCCGATTATT TCCTTGTTGGCAAGGACTTTCCTAACTACTTGGAGTCCCAAGAAGCAGTTGATCAGGCATATCGTGATCAAAAGAGATGGACAAGAATGTCAATTTTGAA CACAGCTGGTTCATACAAATTCAGTAGTGACCGGACTATTCATGAATATGCTAGAGACATATGGAAAATTGAACCTGTTGTCTTACCTTGAAAAGTTACA TGTTGAGTTTTTTAGCATATTCAGCTTGTTCCTTATCTCAGAATTAAGTTCAGAAGGGCTTGAAAACTGAAGAAGAGGTTAAGTTCACTTGAATAGCCAT GCAAAGAATATGTGAGCTTTTGTTGCCCCGGGAGAGTAAAGCTTATCTTCATAGCATTTTGTAATACATTCCCATTCTAAACTTTTCAATCATATTGAAA TTAAATTAAATTTCAATCTTCAATTTAAGACACATGGAATGATATATTTTAACTCTGTGGAACAATAGATTTTCCCCAAGCATAGAAATGCTCATAAGGA TTTAGGGAGTCATGCAGGATCAAGTAGAATTGTTTATCACTTTTCAACCAATATTTTTCTCAGACATGGTTTCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57137; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_73593
| Blastp | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 72.6% of identity |
|---|---|
| Blastx | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 74.91% of identity |
| Eggnog | Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity)(COG0058) |
| Kegg | Link to kegg annotations (102603391) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445910.1) |
| Pfam | Carbohydrate phosphorylase (PF00343.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |