| Id Trinity | FTRINITY_DN56082_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_73562 |
| Sequence | TCCTTCATTCCTTGTATCTTGATGGAATTGATGGTAAAACTTCATTAGAAGGAGTCTTTAGGTGTTTAATCATTTAATTAACCTAGCAACTTCTTTATGC AATATAGCAGTGTCCTCTTGAAATTAAATGGATGCTCTACTCTAATCTTCTCCCAGTCTTCATGTTCTATTGAGCTAAAACATCCAAATTTGTAAGTAAA GTCTAGCTTAACAATTGCAGGCACTTTGGATAATTTTGTAGCAGATTCTGCATCTATTGCTTCTAGCATCAAATATCATGCTGAGTTCAAGACATCCTTT TCTCCAGAGAAGTTTGAGCTTGGTAAGGCATACCTTGCAACTGCACAAAGTGTCTGTGATTCACTCATCATAAATTGGAATGCAACATATGACTATTATG AGAAGATTAATGTTAAGCAAGCTTATTATATGTCTATGGAGTATCTACAGGGCAGGGCATTGCTAAATGCAATTGGTAATTTACAACTCTCGGGTCCTTA TGCTGAGGCTCTCAGAAAGCTGGGTCAAAATTTAGAAGATGTGGCTAATCAGGAACCAGATGCTGCCCTTGGGAATGGTGGATTAGGTAGACTTGCTTCT TGTTTTTTGGACTCATTGGCAACACTTAATTACCCTGCATGGGGATATGGACTTAGATACAAGTATGGTTTATTCAAACAGCTTATAACAAAGGATGGTC AGGAGGAAGAAGCTGAAAGCTGGCTTGAGATGGGAAATCCTTGGGAAATTCAGAGAAATGATGTATCTTATCCAGTTAAGTTCTATGGAGAAGTTATTTC AGGGCCAAATGGAACTAAACAGTGGATTGGAGGAGAAAATATATCAGCTGTTGCTTATGATGTTCCAATACCTGGATACAAAACTAGAACAACTATTAAC CTGAGATTGTGGTCCATTAAAGTTTCACCAGCACAATTTGATTTACAAGCTTTCAATACGGGAGATCATGCCAAAGCATATGCTGCCATGAACAATGCAG AGAAAATTTGCTATGTGTTGTACCCTGGAGATGAATCCTTAGAAGGAAAGATACTGCGATTGAAGCAACAATATACATTATGCTCTGCATCTCTCCAGGA TATTTTTGCACGCTTTGAAAAGAGATCAGGAAATACAGTAAACTGGGACACTTTTCCAGAAAAAGTGGTGGTTCAAATGAATGATACTCACCCAACACTC TGCATTCCTGAACTGATTAGGATATTGATAGATGGAAAGGGTTTAAGCTGGGAAAAAGCTTGGGATATTACCAAAAGTCTGATCCCTCTTTCAATGGCTC TTCTGTTAGAACGGTTGCTTACACAAACCACACAGTTCTGCCGGAAGCGCTAGAGAAATGGAGCTTGACACTTCTGCAGGATTTGCTTCCTCGACATGTG GAGATAATAAGAAGAATAGATGAAGAGTTCATACTTGAAATTATTTCCAAGTATGGGACACATGATCTTGACTTGATACAACAAAAGCTTAGAAAGATGA GAATACTAGAAAATATTGAGTTACCCAACTCAGTGATAGAGCTGATTAATAATTTAAAGAAGGCTCCTGCCTCTGAGGATGTTAAGGAAATTGGTCTTAA TGATAATGATATAAAGGCAACAGAAGAGAAAGAAGATGATGAAGTCGGGGAAGAGGAACAACAACAAGAAGAAGAAGAAGATAACAATTCTACTAGGGAG GATACTGATAAGAAAACGGAGTGGACATTCAAAGTTGATCCGAATTTGCCAAGGATGGTTCGCATGGCTAATCTTTGTGTTGTTGGTGGACTTTCTGTGA ATGGAGTAGCTGAGATTCATAGTGAGATTGTGAAAGATGAAGTTTTCAATGAATTTTACAAGTTGTGGCCAGAGAAATTCCAGAATAAAACAAATGGGGT GACCCCTAGAAGATGGATCCGTTTTTGTAATCCTGATCTTAGTAACATCATAACCAAGTGGATTGGAACAGATGATTGGGTAACTGATCTTCAGAAGTTG GCTGTACTTCGCAAGTTTGCAGATAATGAGGATCTACAATTGGAGTGGACAGCATCCAAAAAAAGAAACAAGATTAAGGTTGCATCATTTCTCAAAGAGA AAACTGGTTATGTTGTCAGTCCAAATGCAATGTTTGATGTACAGGTGAAGCGAATTCATGAATATAAGCGGCAATTACTGAATATTTTGGGAATTGTTTA TCGCTACAAAAAGATGAAAGAATTGAGTGCCGAAGAAAGAAATCAAAAGTTTGTTCCTCGGGTTTGTATTTTCGGAGGAAAAGCATTTGCAACATATGTT CAAGCCAAGAGGATTGTAAAATTCATCGCAGATGTAGGAGCTACAGTCAATCATGATCCAGAAATTGGAGATCTTTTGAAGGTTGTATTTGTCCCTGATT ACAATGTCAGTGTTGCTGAAGTGCTGATTCCTGGCAGTGAGTTGTCCCAGCACATTAGCACTGCTGGAATGGAGGCTAGTGGAACAAGCAACATGAAATT TGCAATGAATGGGTGTGTACTTATAGGAACTCTTGATGGTGCTAATGTTGAAATAAGAGAAGAGGTTGGAGAAGATAACTTCTTTCTTTTTGGTGCACGA GCTAACGAGATCGCTGGGCTGCGGAAAGAAAGAGCTGAGGGAAAGTTTGTATCAGACCCAAGGTTTGAAGAAGTAAAGACATATGTTAGAAGTGGTGTTT TTGGCCCCTACAACTATGAAGAATTGATGGGATCATTGGAAGGAAATGAAGGGTATGGTCGTGCCGATTATTTCCTTGTTGGCAAGGACTTTCCTAACTA CTTGGAGTCCCAAGAAGCAGTTGATCAGGCATATCGTGATCAAAAGAGATGGACAAGAATGTCAATTTTGAACACAGCTGGTTCATACAAATTCAGTAGT GACCGGACTATTCATGAATATGCTAGAGACATATGGAAAATTGAACCTGTTGTCTTACCTTGAAAAGTTACATGTTGAGTTTTTTAGCATATTCAGCTTG TTCCTTATCTCAGAATTAAGTTCAGAAGGGCTTGAAAACTGAAGAAGAGGTTAAGTTCACTTGAATAGCCATGCAAAGAATATGTGAGCTTTTGTTGCCC CGGGAGAGTAAAGCTTATCTTCATAGCATTTTGTAATACATTCCCATTCTAAACTTTTCAATCATATTGAAATTAAATTAAATTTCAATCTTCAATTTAA GACACATGGAATGATATATTTTAACTCTGTGGAACAATAGATTTTCCCCAAGCATAGAAATGCTCATAAGGATTTAGGGAGTCATGCAGGATCAAGTAGA ATTGTTTATCACTTTTCAACCAATATTTTTCTCAGACATGGTTTCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57137; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_73562
| Blastp | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 72.6% of identity |
|---|---|
| Blastx | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 74.91% of identity |
| Eggnog | Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity)(COG0058) |
| Kegg | Link to kegg annotations (102603391) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445910.1) |
| Pfam | Carbohydrate phosphorylase (PF00343.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |