| Id Trinity | FTRINITY_DN56088_c2_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_70930 |
| Sequence | AACATTAGGATTTTGAAGGATAATAAAATGATATGTTTATCTGAGGGGATTACTAGTGAGAATGGGATGCCAGTGGACAAGATCAGAGTACGTCAGCTTG ACCACGAAAATCCAGGAAGTTCGAACGAAGCATCCGTTCCTGATGCAACTGAAGTGGTGATTTTATCTTCCAAAAGTTATTTTACTTTGACTTCTTGAAC AATTGAATATAATTCCAATACAAAATTCTCGGTGATTTAAGGATATATTAAAGTCACCGAACTTTGTTTCTTGGATTGGCATTACAGTCCATAGAAATTC AAGAACTGTGAAGTACATAGCCAATTCTGTTTTCCTTCTCTTCCCTTATGAACTTCATAACCCCCTCTCCCCCCAAATGTTATTAAAATTCTCACTGGGA TTGTCAATTGCTTAAATACACACGACTCATTTTTACATGCTCATTCCACTGATACATCTAAATTCTGTGCTTTTGATGATTGTGTTGTGTCAAAAATACT TGGTTGCATATGTCCATTGTAGTTTTAGGGCTTCTCTTTGCCATCTGCTACACGAACCAAAAATATATAAAGAAAACATTTCATTTTTGTAACTTGTGCA GAATTTAACCAAGTCTGGGGATTTTTGTCCTGCAGTTCAAGGCAATGCTGATAAACTCTTCAAATCCAGCATATCTGGATGTGTTTTAGATGAAGAGTCC ACTGCTTGTTTGCAGAATGCTTCTATGCTTTCTGAATGTCCTCTTCTTCATCCTGCTTCAGAACCACCTGATTCTGGTTTAATAAAGAAAGAAACAATCT CTAATCATGTTCACCCATACATCAAAAAGAAGTTGCAGCAAGTTCATGATGGGGAATCCTTGGAGGGCTTTATATGTCCAAGGGAGGAGGGAAATTCTAC ATATGAGTTCTCTGTGGCCAGTGACTGCTCAAGTAGCCGAAATCAGCAATTAGCTTGCATTGACTTTTCCAAGTCTGATCAAGTATATAAGGAGCAACTG GCTAGGGCTAAAAAAATGAAACTTCTGGAATTTTCTCCAGAAGATGAAGTAGAAGGGGAACTAATATATTACCAGCATAGATTATTCGAAGATAGAGTTG CAAAGAAAGGACTAACTGATAACTTAATCCACAATATTGCCAAGAGTTTGCCACAGGAGATTGATATGTCACATCAGAGAAGATGGGATGCTGTGATTGT GAATCAATATCTGCGTGATCTGAAGGAGGCAAAAAAAGCGGGGCAGAAAAGAAAGAAGGCATAAGGAAGCACAGGCAGTGCTGGCAGCTGCAACTGCTGC TGCTGCAGCATCTACTAGGAGTTCTTTACGAAAAGACACCTTAGATGAATCTATGCAACAGGAGAATTTGGTGAAGTTGGATACTTTAAGTGGGAGGACT GGTGTTTCTTCTCAACCATTGCCACGAGCCAAAGAGACACTCTCTAGAGTAGCTGTGACAAGAACTTCGTCAGAGAAATATTCGGATTTTGGCTTGTCAA TCTCAAATTTCTCCAAGGAGCAGCCTAAATTATGCGATATCTGCGGACGATCTGAGACTATGTTAAACCCCGTCCTACTCTGCTCTGGTTGCAAGGTTGC AGTTCACTTGGATTGCTATCGTAGTGTGAAAGATACAATGGGTCCATGGTACTGTGAATTATGTGAAAGTTTATCATCTAGAAGCTCTGCAACATCTACT ATCAATTCCCGGGAGAAGCCTTATTTTGTTGCAGAGTGTGCTCTCTGTGGTGGTACTACTGGAGCTTTTAGGAGGTCTTGTGATGGCCAATGGGTTCATG CTTTTTGTGCCGAGTGGGTTTTTGAGTCGACATTCAGAAGAGGACAAATAAATGCTGTTGAAGGAGTGGAAACTTTATTGAAGGGAACTGATATTTGCTG CATCTGTTGCTGCAAGCATGGTGTATGCATGAAGTGTTGCTATGGCCATTGCCGAACCACATTCCATCCGTACTGTGCTAGAAGTGTTGGTTTGTACATG AATGTCAGGACTACTGGTGGCAAGCTGCAACACAAGGCTTACTGTCAAAGACATAGTTTGGAGCAGAAGGAAAAGGCTGAGACACAAAAACATGGAATTG GAGAGTTTAAAAGAATGAAGCAAATTAGGGTGAGGCTTCCTTTCCCATCCTTTTATCCTGGAGTCCTTTCTCATTTTTTTGTTAGGCTTGATGTACTGCT GATGGCATTGTTGTATCTTTTGATCTGTGATTGAAATCAATTAATGAGATTGCTGAGTTTCCTAGGGAGGGATTTGAAAGATTTATGAGGTTGGAAAGTA TCTTGTTGTTTTGGAGGATATCGTGGAAGAGTTTTTTAGCAAAGCACAGCCAAGTTGTGGGCATTGAAGTGCTTTGCATTAAAGAAATGGTTGGCAAGAG AACATTAAAGAGCCTAGGATTTAATTCTCCTATCTAAAATTATACTTGATAAATTTTAGTGAAATTGAATGAGTAGTGTTATGTTCGCTACAATTATAAT ACCACTCTCAAGACAACTCAAAGGATAGTAACTGCCTCAGCATTTTAGGTGTCATGTTTTCACTTAATGAAACTCTCCATTCCATTCATTTAGGGGGATT CTTGTGCTTTTTATTTTCTGTGATGTCTTAACCCGGCTAGGTATCTTTCATTTGTTGTTATTATATTAAGTCCCATTGTAGAGTTGTCATTTATGAAAAA CAAGAGTGAAAATGTATACTATTATATTAACAAACACTTTGTCGACAACAATATATTATCAAGATAAGTGGTCTCCCACAATATTTATATTTTCTGGTAG TTGAGTATCCTGGCATTTTGTATTTTTGCCTGTCCAAAAACTTCATGCCGTTGTGGCAATCACATACCTACAAAATTTGGCCTCTTATTATTGTTCCCCT AAGCTTTAGACATATAATCTGGTATTGGGAATTATCTGTTATTGTGGGTGAAATGTTGATAATTATCAGACATTGGGGAAGATGAGCGGAAAAGTGGGAA GTGATATCAGGATGAATTAGCCAGTGCTTGTCAAGCCCTGTAATCTGGAACAGTTGCTGTAGGTATATAGATTCCTTTGTTTTGAAATTAGTGATGTACT GATCCTCACTTGTGTGCATGCCAAGTCACCAATATATTTGTTAGCAAGAATAAATAAAATAATTGAAACTTTAAAATAACTATGCACCAATCCCAACTTA TTTCTAGGGAATGTGTGTGTATGTAATGGGTATGACATTTATTTGAGCAAGAGATCTCTGTCTGCGAAGCAGTGCTAATTGTAAGTGACACG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57186; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_70930
| Blastp | NuA3 HAT complex component NTO1 from Saccharomyces with 30.94% of identity |
|---|---|
| Blastx | Peregrin from Homo with 28.24% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YPR031W) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416931.1) |
| Pfam | PHD-finger (PF00628.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |