Ll_transcript_70938

• Id Trinity: FTRINITY_DN56088_c2_g3_i6
• Name Transcript: Ll_transcript_70938
• Sequence: AACATTAGGATTTTGAAGGATAATAAAATGATATGTTTATCTGAGGGGATTACTAGTGAGAATGGGATGCCAGTGGACAAGATCAGAGTACGTCAGCTTG ACCACGAAAATCCAGGAAGTTCGAACGAAGCATCCGTTCCTGATGCAACTGAAGTGGTGATTTTATCTTCCAAAAGTTATTTTACTTTGACTTCTTGAAC AATTGAATATAATTCCAATACAAAATTCTCGGTGATTTAAGGATATATTAAAGTCACCGAACTTTGTTTCTTGGATTGGCATTACAGTCCATAGAAATTC AAGAACTGTGAAGTACATAGCCAATTCTGTTTTCCTTCTCTTCCCTTATGAACTTCATAACCCCCTCTCCCCCCAAATGTTATTAAAATTCTCACTGGGA TTGTCAATTGCTTAAATACACACGACTCATTTTTACATGCTCATTCCACTGATACATCTAAATTCTGTGCTTTTGATGATTGTGTTGTGTCAAAAATACT TGGTTGCATATGTCCATTGTAGTTTTAGGGCTTCTCTTTGCCATCTGCTACACGAACCAAAAATATATAAAGAAAACATTTCATTTTTGTAACTTGTGCA GAATTTAACCAAGTCTGGGGATTTTTGTCCTGCAGTTCAAGGTATGGCCTCATATTTAACTCTCATTTAAAAATTCTAGAGCAATTTAGCCCATCGTCTT CCTTTCTTTTTTCTTTTGAACAAAAAAAGAAGAGTATGTTATTATGTTTGGAATTGCTTGGTCTTAAAGGATTTAGATATTTATACTCCAGAATCCAGAT GTCTGTGATCTACTTTATATGAGTATTGGCAAATTTTATTCCTATTTTTCGTTGAATGTTAAAGTGTTTTTCAGCTGATGTTTTATGTTTTTAAAATGCG TCACTAAATTATGCAGGCAATGCTGATAAACTCTTCAAATCCAGCATATCTGGATGTGTTTTAGATGAAGAGTCCACTGCTTGTTTGCAGAATGCTTCTA TGCTTTCTGAATGTCCTCTTCTTCATCCTGCTTCAGAACCACCTGATTCTGGTTTAATGTGAGCTTTTCGAAAGGGCTATTTTTTGTTATTTACAGCATG TACTGCTTTCTGTTCGTGATGATGTGTTACTGGACTATCTTTTATGTATCTTGCTCAGGTTGGGTTTTTCTTTTAAAAACCTGTGTTTCATTTTTTGTAA TGCAGAAAGAAAGAAACAATCTCTAATCATGTTCACCCATACATCAAAAAGAAGTTGCAGCAAGTTCATGATGGGGAATCCTTGGAGGGCTTTATATGTG AGATATGAATATCTTTTGGAAGTGTTTGGGACAACTGTTCTAATTTTCTCTGTACATTAAACCTATTTATATGATATTTGGGGATGGGAAATATGAAACT ATTTGAAATCTCAAAGTACAATATGTTGAAACCAATGGTGAGATGGTATTAAAACGCAAATATAAATAAACAGGTTTCCAAGCATTTGAGAAATTGGATT GATCACATACCGAATTTCTCGTCAATGTTTTATTTAATTCTCTTTGGAAGGGTCTAATAGATTCTTCACTAAGCAGGTCCAAGGGAGGAGGGAAATTCTA CATATGAGTTCTCTGTGGCCAGTGACTGCTCAAGTAGCCGAAATCAGCAATTAGCTTGCATTGACTTTTCCAAGTCTGATCAAGTATATAAGGAGCAACT GGCTAGGGCTAAAAAAATGAAACTTCTGGAATTTTCTCCAGAAGATGAAGTAGAAGGGGAACTAATATATTACCAGCATAGATTATTCGAAGATAGAGTT GCAAAGAAAGGACTAACTGATAACTTAATCCACAATATTGCCAAGAGTTTGCCACAGGAGATTGATATGTCACATCAGAGAAGATGGGATGCTGTGATTG TGAATCAATATCTGCGTGATCTGAAGGAGGCAAAAAAAGCGGGGCAGAAAAGAAAGAAGGCATAAGGAAGCACAGGCAGTGCTGGCAGCTGCAACTGCTG CTGCTGCAGCATCTACTAGGAGTTCTTTACGAAAAGACACCTTAGATGAATCTATGCAACAGGAGAATTTGGTGAAGTTGGATACTTTAAGTGGGAGGAC TGGTGTTTCTTCTCAACCATTGCCACGAGCCAAAGAGACACTCTCTAGAGTAGCTGTGACAAGAACTTCGTCAGAGAAATATTCGGATTTTGGCTTGTCA ATCTCAAATTTCTCCAAGGAGCAGCCTAAATTATGCGATATCTGCGGACGATCTGAGACTATGTTAAACCCCGTCCTACTCTGCTCTGGTTGCAAGGTTG CAGTTCACTTGGATTGCTATCGTAGTGTGAAAGATACAATGGGTCCATGGTACTGTGAATTATGTGAAAGTTTATCATCTAGAAGCTCTGCAACATCTAC TATCAATTCCCGGGAGAAGCCTTATTTTGTTGCAGAGTGTGCTCTCTGTGGTGGTACTACTGGAGCTTTTAGGAGGTCTTGTGATGGCCAATGGGTTCAT GCTTTTTGTGCCGAGTGGGTTTTTGAGTCGACATTCAGAAGAGGACAAATAAATGCTGTTGAAGGAGTGGAAACTTTATTGAAGGGAACTGATATTTGCT GCATCTGTTGCTGCAAGCATGGTGTATGCATGAAGTGTTGCTATGGCCATTGCCGAACCACATTCCATCCGTACTGTGCTAGAAGTGTTGGTTTGTACAT GAATGTCAGGACTACTGGTGGCAAGCTGCAACACAAGGCTTACTGTCAAAGACATAGTTTGGAGCAGAAGGAAAAGGCTGAGACACAAAAACATGGAATT GGAGAGTTTAAAAGAATGAAGCAAATTAGGGTTGAACTTGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAAATAAAGCGGGAGTTGA TTCTATGCTCACATAACATGCTTGCCTTCAAAAGGGATCATGTTGCTAGGTCTATGCTGGTTCATAGCCCGTTCATACTTCCAGATGGCAGTTCAGAATC AGCTACAACATCCCTCAAAGGGAACACTGAGGGATACAGATCATGCAGTGAAGCTGTCCAACAATCAGATGATGTGACTGTGGACAGCTCAATTTCTGCT AAGCGCCATGTTAGACTTGCTGTATCCATGGACACAGACCCAAAAGTGGATGATGACTGCTCAACCTCACAAAGTCAATATAACCAGAAGATTCCAGAAA GGATGCAATTTTCTGGCAAGCAGATTCCCCGTAGAGCTTCCACCACATTGCTTTATCATTCAGATGAGGGTGGAAGGAGATCCAAATCTAGGAAGCATGC AGAGACATTTGGAAAAGAGCTTGTTATGACGTCGGATGAAGCATCTAT
• Tissue: flowers
• Gene name: LI_gene_57186;
• Additional information: details;

Expression of Ll_transcript_70938

FPKM

• FPAB: 0.7
• FPNAB: 0.3
• LF1: 0.1
• LF2: 0.3
• LF3: 0.3
• LF4: 0.2
• UF1: 0.1
• UF2: 0.2
• UF3: 0.1
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_70938

• Blastp: NuA3 HAT complex component NTO1 from Saccharomyces with 32.97% of identity
• Blastx: Peregrin from Mus with 28.24% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YPR031W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416932.1)
• Pfam: PHD-finger (PF00628.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;