| Id Trinity | FTRINITY_DN56113_c3_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_226859 |
| Sequence | GTTATCGTGTGTTTCTTCTTAGTCTTAACAACGTTTGTTGCAGAGTTCTTGAAAGCAAAGAATTTGGGATCGACCCATTATCTTCGATCCGATCCATCAA AGATGAATATTTTCAGGTTATCTGGGGATATGACCCATTTGGCTAGTGTCCTTGTTCTTCTCCTCAAGATCCATACCATCAAATCTTGCGCTGGTGTCTC GTTGAAGACTCAAGAACTCTATGCACTTGTTTTTGCTTCTCGCTACTTGGATATCTTTACTCATTATATATCAGTATATAATACCACTATGAAGTTGATT TTCTTAGGAAGCTCATTTTCTATTGTGTGGTACATGAGGTATCACAAGATTGTTCGTAGAACATATAACAAAGATCAAGATACTTTTCGCCATTATATTC TTATTCTGCCCTGCTTACTATTGGCCTTAGTCATCAATGAGAGATTCACATTTAGAGAGGTGATGTGGGCATTTTCCCTGTATTTGGAAGCCGTTGCTAT ACTTCCTCAACTAGTACTGTTACAGAGAACTAGAAATATTGACAATTTGACAGGACAATACGTGTTTCTTCTCGGTGCGTATAGAGCACTATACATTCTC AACTGGATCTACCGCTACTTTACCGAGCCGCACTTTATCCACTGGATAACATGGATTTCTGGCCTTGTTCAAACACTGCTCTATGCCGACTTTTTCTATT ACTATATCCAAAGTTGGAAGAACAACCAAAAGCTTCATCTGCCAGCATGAGTTCCATAGTTCTTGAAAAGCAAGGTTCTTCTGTGGACAATTAACACTGA GCAAAACATGATCCATGTATTTTTTTCTGGGCATGTGATTTCTGAATTATGATTCCATATATGTTGATTCTTGGTCCCTCATATACTACTAATTACAAAA ATACATCAACTATAATGCAATTTTAACTTGAGAAAGTATTGATATATTACCATTATTGTATTATCTATCATTTATGTTTTTCGTCATTAATTCTTTAAAA AGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57406; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_226859
| Blastp | ER lumen protein-retaining receptor B from Arabidopsis with 83.26% of identity |
|---|---|
| Blastx | ER lumen protein-retaining receptor from Petunia with 86.98% of identity |
| Eggnog | Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi (By similarity)(COG5196) |
| Kegg | Link to kegg annotations (AT3G25040) |
| CantataDB | Link to cantataDB annotations (CNT0001350) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431799.1) |
| Pfam | ER lumen protein retaining receptor (PF00810.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |